Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00257 ATGGCGCCCTCGTTTGATTGGTGGGGAAAAGACACTCACAGAGGAACCCCTGTTGTTGTCAAGATGGAGAATCCAAATTGGTCGATGGTTGAACTGGAAGGTCCGTCGGAGGATGATTTTCTCATCGCTGGTGAGTCACCCACGAGTCGGGCACATAGAGCCGCTGGTTGTTTAACTTCCATTGGCTCTGCAATGGTGGACCTTGCCGCCGCCGTTAGACGCCGTGTTGCTTCTGGACGGACTGATGAGGAGGACGCCGACAATGACGTCACTGTCGGAGGTAGAGAGAAAGAGAACCCGACTGTTAAAACGAGATTCTATTCTTGTATTAAGGTGTTTCTATGGCTGTCGGTGCTTATGTTGTGTTTTGAGATTGCGGCTTTCTTTAAGGGCTGGCATTTTGGTAGTCCAAAGCTTCAATTGGATTATCTCTGGGCATCGCCTTGGGGTTTTAAAGGAGTTTTTGGTTGGATTTACGCTCAGTGGGTATTGATTCGAGTAGAATATTTAGCTCCTCCCCTACAGTTCTTAGCCAATGCTTGTATCATATTGTTCATCATTCAAAGCTTGGATCGTTTAGTCTTGTGTTTGGGTTGTTTCTGGATCCGTTTCAAGAAAATCCAACCAGTTCTTAAACCTGAAGATGAAGATCTTGAATCCGGAGAGAAGGGATATTTCCCTATGGTTCTTGTTCAGATCCCTATGTGCAATGAAAAAGAGGTTTATCAGCAATCAATTGCTGCTATTTGCAACTTGGACTGGCCAAAAACCAAGCTACTGATACAAGTTCTTGATGATTCCGATGACCCAACTACCCAGTTGTTGATTAAAGAGGAGGTTCATAAATGGCAGCAAGAGGGTGCCAACATTATTTATCGGCACCGAGTCATTAGAGATGGTTATAAGGCTGGCAATCTCAAATCCGCCATGAATTGTAGCTATGTAAAAGACTATGAATTTGTTGCCATTTTCGATGCCGATTTTCAACCCACACCTGATTTCCTTAAAAGAACTGTTCCTCATTTCAAGGACAACGAAGAGTTGGGACTGGTTCAAGCAAGGTGGTCTTTTGTGAACAGGGATGAGAACTTGCTAACCAGGCTGCAGAACATCAATTTAGCTTTCCATTTTGAAGTAGAGCAGCAAGTGAACGGTGTCTTCCTCAACTTCTTTGGATTCAATGGCACTGCTGGTGTGTGGAGGATTAAAGCTCTCGAGGACGCTGGTGGGTGGTTGGAAAGGACCACCGTTGAGGACATGGATATCGCCGTTCGTGCTCATCTTCATGGATGGAAATTCATATTCCTAAACGATGTCGAGTGCCAGTGTGAGCTACCAGAATCTTATGAAGCTTATAGAAAACAACAACATAGATGGCATTCTGGTCCAATGCAATTGTTTCGCCTTTGTTTGCCTGCTGTTATTCGATCAAAGATTAGTATATGGAAGAAGTTCAACTTGATCTTCCTCTTCTTTTTGCTCAGAAAGTTGATTTTGCCCTTCTATTCTTTCACACTTTTCTGCATAATTCTCCCAATGACAATGTTTGTTCCTGAGGCCGAGCTACCCGCTTGGGTCGTTTGCTATATCCCTGCCACCATGTCATTTCTAAACATTCTGCCTGCCCCAAAATCCTTTCCTTTCATTGTCCCTTACCTCCTTTTTGAGAACACCATGTCAGTCACCAAGTTCAATGCCATGATCTCGGGCTTGTTCCAGCTCGGTAGTGCCTATGAATGGGTTGTTACAAAGAAATCTGGCCGTTCCTCAGAGGGCGATCTTGTCTCCTTGGTAGAGAGAGAGAAAAAGCATCAGAGAGGGGCTTCAGCACCCGACCTAGAAGAGCTGAAAGAAGAAATTCAGAAGCAAGAGAAGAAAGCTGCTTTACGAAAGAAGCACAACAGAATATACACAAAAGAGCTCGCATTAGCTTTCCTCCTCCTAACCGCATCGGCACGGAGCCTTCTGTCTGCACAAGGTATCCATTTCTACTTCTTGCTGTTCCAGGGGATCTCGTTCCTGCTGGTCGGTTTGGACTTGATCGGCGAACAGATAGGTTGA 2061 44.98 MAPSFDWWGKDTHRGTPVVVKMENPNWSMVELEGPSEDDFLIAGESPTSRAHRAAGCLTSIGSAMVDLAAAVRRRVASGRTDEEDADNDVTVGGREKENPTVKTRFYSCIKVFLWLSVLMLCFEIAAFFKGWHFGSPKLQLDYLWASPWGFKGVFGWIYAQWVLIRVEYLAPPLQFLANACIILFIIQSLDRLVLCLGCFWIRFKKIQPVLKPEDEDLESGEKGYFPMVLVQIPMCNEKEVYQQSIAAICNLDWPKTKLLIQVLDDSDDPTTQLLIKEEVHKWQQEGANIIYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNEELGLVQARWSFVNRDENLLTRLQNINLAFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEDAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAVIRSKISIWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEREKKHQRGASAPDLEELKEEIQKQEKKAALRKKHNRIYTKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQIG 686
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1672646 1675677 + MELO3C016842.2.1 Cme07g00257 332273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00257 686 Coils Coil 613 633 - -
Cme07g00257 686 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 219 444 IPR029044 -
Cme07g00257 686 PANTHER - 8 685 - -
Cme07g00257 686 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 8 685 - -
Cme07g00257 686 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 506 IPR029044 -
Cme07g00257 686 Pfam Glycosyl transferase family group 2 321 517 IPR001173 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02441 Cme-Chr4:31031465 Cme07g00257 Cme-Chr7:1672646 1.88E-133 dispersed
Cme07g00257 Cme-Chr7:1672646 Cme08g01230 Cme-Chr8:8748148 1.54E-143 dispersed
Cme04g00326 Cme-Chr4:2611900 Cme07g00257 Cme-Chr7:1672646 0 transposed
Cme09g00337 Cme-Chr9:2882557 Cme07g00257 Cme-Chr7:1672646 0 transposed
Cme03g02127 Cme-Chr3:28494790 Cme07g00257 Cme-Chr7:1672646 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00257 - - csv:101204215 1320.84