Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00271 ATGGCCACTCTCCTTTTCAGGTCCGCAATTTTCTTACTCCTTCTTTTTCAGCTTCCCTCCTCCTCCGCCGGCGTTTCATCTTGGTCAGTTAAGCATCTTCCTGGGTTCTCAGGTCCTCTTCCGTTCGAACTCGAAACCGGATATGTGAGCGTGGGAGATTCAGATGAAGTTGAATTATTTTATTACTTTGTGAAGTCACAAGGAAATCCCCAAACGGATCCCCTAATGAGTTGGTTCGATGGAGGCCCCGGTTGCTCGGGTTTCACTGGACTCTTCGTTGAAATTGGTCCCCTAAATTTGAAGGTAGAGCCATACAATGGAAGCCTACCTCAGATAATCTTAAATCCTCATACATGGACTAAGAACACAAGTATACTATTCGTAGATTCGGTTGTGTACTCTGGATTTTCGTATCCTCGAACCCCACATGGAGCTAAAAAAGGAGACTTCATACAAATCAATCAAAGTCACCAATTTTTGAGAAAGTGGCTTGCAGCTCATCCTGAATTCATATCTAATCCATTTTATGTTGGTGGAGTCTCTTATGCTGGTATGATTGTTCCACCTATTACTCAAGCTATCTCAGAAGGAAATAAATATGGTGTCCCTGTTATAAACCTTCAGGGATATATAGTTGGAAACCCAGTTAGCGTACGTGGAAGAAATGAAAATTTAGCGATTCCTTTTGCTCATGGCATGAACCTCATCCCTACTCAATTGTATGAGTCATTGACCAGTAGTTGCAAAGGAGAATATGTGAAGGTTGATCCAAATAACGTGGACTGCATAAAACATGTATCAACCTACAAAAAGTGTGTGAGTAGAATCAATGTTTGGTGTATTTTGCGTCGTTTTTGCAAACCCCCAAGCGAAAGACCTGAACCTCGAAGATCTCTCTATAACAGCTTTGATGATCAACAATTGCTTCAGCTTCCTCAGAAAACCTTACCTCAATATGCTATTGATTGTGAAGAGTATAAAGGCAATCTCGGTTACTACTGGGCTAATGATGATCGAGTTCAAGAAGCACTTCATATTCGTAAGGGGACAATTCCAGAATGGGATAGATGCAATACTACTGATGATTATGAGTATGAAATTTCGAATGTTGTTCCTTATCATGCAAACCTCAGTCTTAAAGGTTATCGGTCTTTGGTTTTTAGTGGAGATCATGACATGAGAGTTCCGACCATAGACACTAAAGAATGGGTCGATTCTCTAAATTATTCAATTGTTGATGATTGGAGACCTTGGTTTATTTTAGATGATCAAGTACTCGGCTACACAATGACATATGCAAATAACATGACATTTGCAACCATTAAAGGTGGAGGACACACACCACAATACACTGCGTACCAAAGCGGAATAATGTTCAATAGATGGATAGTAGGAGAAGCTTTATAA 1407 40.3 MATLLFRSAIFLLLLFQLPSSSAGVSSWSVKHLPGFSGPLPFELETGYVSVGDSDEVELFYYFVKSQGNPQTDPLMSWFDGGPGCSGFTGLFVEIGPLNLKVEPYNGSLPQIILNPHTWTKNTSILFVDSVVYSGFSYPRTPHGAKKGDFIQINQSHQFLRKWLAAHPEFISNPFYVGGVSYAGMIVPPITQAISEGNKYGVPVINLQGYIVGNPVSVRGRNENLAIPFAHGMNLIPTQLYESLTSSCKGEYVKVDPNNVDCIKHVSTYKKCVSRINVWCILRRFCKPPSERPEPRRSLYNSFDDQQLLQLPQKTLPQYAIDCEEYKGNLGYYWANDDRVQEALHIRKGTIPEWDRCNTTDDYEYEISNVVPYHANLSLKGYRSLVFSGDHDMRVPTIDTKEWVDSLNYSIVDDWRPWFILDDQVLGYTMTYANNMTFATIKGGGHTPQYTAYQSGIMFNRWIVGEAL 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1762900 1768781 + MELO3C032313.2.1 Cme07g00271 332287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00271 468 Pfam Serine carboxypeptidase 34 464 IPR001563 GO:0004185|GO:0006508
Cme07g00271 468 Gene3D - 323 467 - -
Cme07g00271 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Cme07g00271 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Cme07g00271 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Cme07g00271 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Cme07g00271 468 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 20 466 - -
Cme07g00271 468 SUPERFAMILY alpha/beta-Hydrolases 30 465 IPR029058 -
Cme07g00271 468 Gene3D alpha/beta hydrolase 25 294 IPR029058 -
Cme07g00271 468 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 20 466 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00271 Cme-Chr7:1762900 Cme07g00274 Cme-Chr7:1784556 0 dispersed
Cme07g00270 Cme-Chr7:1757953 Cme07g00271 Cme-Chr7:1762900 3.02E-155 tandem
Cme07g00271 Cme-Chr7:1762900 Cme07g00272 Cme-Chr7:1771535 1.17E-153 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00271 K16296 - csv:101210918 509.605