Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00272 ATGGAAAACAGTTATGTGGGTGTTGGGGATTTGGAGGAAGTTCAATTGTTCTATTACTTTGTGAAATCGGAAGGAAATCCGAAGACGGATCCTCTGCTTTTTTGGCTCACCGGCGGCCCTGGTTGCTCTGCTTTAACTGCACTTGCCTTTGAAGTTGGTCCCATAAATTTTAAGATCAAGGAATACGATGGGAGCTTACCTGAAGTAATCTTGAACCCTTATTCATGGACGAAGTGGTTAATTCGTCATCCAGAATTTTTATCTAATCCATTTTACGTCGGTGGAGATTCTTATTCTGGTATTGTCATTCCAGTTATTGCTCAAGAAATTTTGGAAGAAAATAAGCATGCTCCATATATAAATCAGCAGGGATACATATTGGGAAATCCGGTCACTGTTGGTACCACATATCAGAATTTTGCAATTCCTTTTGCTCATAGAATGACTCTTATTCCTGATGAACTATTTGAGTCATTGACCTCTAGTTGCAAGGGAGAATATGTAAATATTGATCCGAGCAATGTGGATTGTTTAAGACATTATAATACATACCAAAAGTGTATATCAAAAATCCACAAAGCAAATATTTTGTTGCCAAAATGTTCGTTTCATTCTCCAAAGAGACAAGAAGATGCAATATTTGATGGAAGATCTCTTTACAATACTCCCAAAGTGCTTCTTGATCCCGAGCCATCAATTCCTTCCCTTGATTGTCCTGCCTATAAATTTCTACTTTCTTCTTATTGGGCGAACAATGATCAAGTTCGAAAAGCACTTCACATACGGAAGGGAAGCATAGGAGAATGGACAAGATGTAGTGATGGACAAAATTACAATTATGATATTGAGAATGCTTTTCCTTATCACGTAAATCTTAGTTCTAAAGGTTACCGTGGGGATCATGATATGGTTGTATCGCATTTGGACACTCAAGCATGGATTAAGTCTTTAAACTATTCCATTGTCGAGGATTGGAGACCTTGGTTCATTGCGGATCAAGTAGCGGGATATACAAGAAGCTATGCAAATAATATGACATTTGCCACAATAAAGGGTGGAGGGCACACAGCAGAATATACACTAAAAGAATGCAGTGTAATATTTAGCAGATGGATAGCTAGAGAATCTTTATAA 1134 37.74 MENSYVGVGDLEEVQLFYYFVKSEGNPKTDPLLFWLTGGPGCSALTALAFEVGPINFKIKEYDGSLPEVILNPYSWTKWLIRHPEFLSNPFYVGGDSYSGIVIPVIAQEILEENKHAPYINQQGYILGNPVTVGTTYQNFAIPFAHRMTLIPDELFESLTSSCKGEYVNIDPSNVDCLRHYNTYQKCISKIHKANILLPKCSFHSPKRQEDAIFDGRSLYNTPKVLLDPEPSIPSLDCPAYKFLLSSYWANNDQVRKALHIRKGSIGEWTRCSDGQNYNYDIENAFPYHVNLSSKGYRGDHDMVVSHLDTQAWIKSLNYSIVEDWRPWFIADQVAGYTRSYANNMTFATIKGGGHTAEYTLKECSVIFSRWIARESL 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1771535 1775547 + MELO3C032309.2.1 Cme07g00272 332288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00272 377 Pfam Serine carboxypeptidase 78 373 IPR001563 GO:0004185|GO:0006508
Cme07g00272 377 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 4 78 IPR001563 GO:0004185|GO:0006508
Cme07g00272 377 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 78 375 - -
Cme07g00272 377 SUPERFAMILY alpha/beta-Hydrolases 5 374 IPR029058 -
Cme07g00272 377 PRINTS Carboxypeptidase C serine protease (S10) family signature 79 104 IPR001563 GO:0004185|GO:0006508
Cme07g00272 377 PRINTS Carboxypeptidase C serine protease (S10) family signature 345 358 IPR001563 GO:0004185|GO:0006508
Cme07g00272 377 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 4 78 - -
Cme07g00272 377 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 78 375 IPR001563 GO:0004185|GO:0006508
Cme07g00272 377 Gene3D alpha/beta hydrolase 1 77 IPR029058 -
Cme07g00272 377 Gene3D alpha/beta hydrolase 78 377 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00272 Cme-Chr7:1771535 Cme07g00274 Cme-Chr7:1784556 4.68E-180 dispersed
Cme07g00271 Cme-Chr7:1762900 Cme07g00272 Cme-Chr7:1771535 1.17E-153 tandem
Cme07g00272 Cme-Chr7:1771535 Cme07g00273 Cme-Chr7:1775326 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00272 K16296 - csv:101207623 460.299