Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00273 ATGCCCACCCCCGTCTTCCGCCTCTCTATTTTATTGGTCTCTGTTTTTCAAATCATATTCGCCGCAGCGTCGCATTGGACGGTGGAGTTTCTGCCCGGATTTCCAGGTCGTCTCCCCTTCGAATTGGAAACAGGTTATGTGGGTGTTGGGGATTTGGAGGAAGTTCAATTGTTCTATTACTTTGTGAAATCGGAAGGAAATCCGAAGACGGACCCTCTGCTTTTTTGGCTCACCGGAGGCCCTGGTTGCTCTGCTTTAACTGCACTTGCCTTTGAAGTTGGTCCCATAAATTTTAAGATCGAGGAATACAATGGGAGCTTACCTCAAATAATCTTGAACCCTTATTCATGGACAAAGAAATCGAGTATATTATTTGTAGATTTGCCGGTGGGAACAGGATTTTCATATGGTACAACACCACAATCTCTTAAGAAAGGAGACTTTAGTCAAGTTCATCATTCTATTCAATTTTTTAAAAAGTGGTTAATTCGTCATCCAGAATTTTTATCTAATCCATTTTACGTGGGTGGAGATTCTTATTCTAGTATTCTCATTCCAGTTATTGCTCAAAAAATTTTGGAAGAAAACGAGCATGCTCCCTATATAAATCTACAGGGATACATATTGGGAAATCCTGTCACCATTCGTACCACATATCGGAATTTTGCAATTCCGTTTGCTCATAGAATGACTCTTATTTCTGATGAACTATTTGAGTCATTGGTCTCTAGTTGCAAGGGAGAATACGTAAATATTGATCCGAGCAATGTGGATTACTTGAGACATTATAATACATACCAACAGTGTATTTCAAAAGTCCAGAAAGCAAATATTTTGTTGCCAAAATGTTCGTTTCATTCTCCAAAGAGACAAGAAGATGCAATATTTGAACGAAGATCTCTTTACAATACCCCCAAAGTGCTTCTTGATCCCGAGCCATCAATTCCTTCTATTGATTGTCCTACCTATAAATTCCTACTTTCTTCTTATTGGATGAACGATGATCAAGTTCGAAAAGCACTTCATGTACGGGAGGGAAGCGTAGGAGAATGGACAAGATGCAGTGACAAACAAGATTACAATTATGATATTGAGAATGTTTTTCCTTATCATGTGAACCTTAGTTCTAAAGGTTACCGTGGAGATCATGATATGGTTGTTCCACATTTGGACACTCAAGCATGGATTAAATCTTTAAACTATTCCATTGTTGAGGATTGGAGACCTTGGTTCATTGCGAATCAAGTAGCGGGATATACAAGAAGCTATGCAAATAATATGACATTTGCCACAATAAAGGGTGGAGGGCACACAGCGGAATATACACTAAAGGAATGTAGTGTCGTATTTAGTAGATGGATCGCTAGAGAACCCTTATAA 1380 38.91 MPTPVFRLSILLVSVFQIIFAAASHWTVEFLPGFPGRLPFELETGYVGVGDLEEVQLFYYFVKSEGNPKTDPLLFWLTGGPGCSALTALAFEVGPINFKIEEYNGSLPQIILNPYSWTKKSSILFVDLPVGTGFSYGTTPQSLKKGDFSQVHHSIQFFKKWLIRHPEFLSNPFYVGGDSYSSILIPVIAQKILEENEHAPYINLQGYILGNPVTIRTTYRNFAIPFAHRMTLISDELFESLVSSCKGEYVNIDPSNVDYLRHYNTYQQCISKVQKANILLPKCSFHSPKRQEDAIFERRSLYNTPKVLLDPEPSIPSIDCPTYKFLLSSYWMNDDQVRKALHVREGSVGEWTRCSDKQDYNYDIENVFPYHVNLSSKGYRGDHDMVVPHLDTQAWIKSLNYSIVEDWRPWFIANQVAGYTRSYANNMTFATIKGGGHTAEYTLKECSVVFSRWIAREPL 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1775326 1778787 - MELO3C016830.2.1 Cme07g00273 332289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00273 459 Pfam Serine carboxypeptidase 32 455 IPR001563 GO:0004185|GO:0006508
Cme07g00273 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 457 IPR001563 GO:0004185|GO:0006508
Cme07g00273 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Cme07g00273 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Cme07g00273 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Cme07g00273 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Cme07g00273 459 Gene3D alpha/beta hydrolase 35 458 IPR029058 -
Cme07g00273 459 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 18 457 - -
Cme07g00273 459 SUPERFAMILY alpha/beta-Hydrolases 28 457 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00270 Cme-Chr7:1757953 Cme07g00273 Cme-Chr7:1775326 0 dispersed
Cme07g00273 Cme-Chr7:1775326 Cme07g00275 Cme-Chr7:1792558 0 dispersed
Cme07g00272 Cme-Chr7:1771535 Cme07g00273 Cme-Chr7:1775326 0 tandem
Cme07g00273 Cme-Chr7:1775326 Cme07g00274 Cme-Chr7:1784556 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00273 K16296 - cit:102630827 571.622