Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00274 ATGGGTGTGTTTTTATATAGGCCAACAGGGATCTACGTAACATATGCCAACATTGATCTATCTCCCATGGCCACTCTCCTTTTCAGGTCCGCAGTTTTCTTCCTCCTTCTTCTTTTTCAGCTTCCTTCCTCCTCCGCCGGCGTCTCATCTAGGTCAGTTAAGCATCTTCCTGGGTTCTCAGGTCCTCTTCCGTTCGAACTCGAAACCGGATATGTGGGTGTGGGCGAAAGAGAGGAAATCCAACTATTTTACTATTTTGTAAAATCAGAAGGAAATCCTAAAAATGATCCCCTCATTGTCTGGTTAACTGGAGGCCCAGGTTGCTCTTCTGTTTCAGGATTTGCCTTCGAAAATGGTCCTCTAAATTTCAAGATAGAGGAATATAATGGGAGTTTACCTCAACTACAGTTAAACCCTTATTCATGGACAAAGAATTGTAGTATAATATTTCTGGATTCACCTGTGGGCTCTGGTTTTTCCTATGGTAAAACTTTACAATCTCTCAACTCAGGAGATCTTACTCAAGTTCATCATATTCATCAATTTGTGAGGAAGTGGCTGATCGAACATCCTGAGTTTACATCAAATCCATTTTACGTTGGTGGAGACTCATATTCTGGTATTACTGTTCCAGCGATTGCTTATGAAATATTAGAAGGAAATGAGCACATCTTACCTGCAATAAATCTTCAGGGGTATATCTTGGGGAATCCTGTCACGGACACTAATACAAATGATAATTACGCAATCCCATTTGCTCATAGCATGACACTCATTTCCGATGAATTATTTGAGTCATTAACAAGTAGTTGCAAAGGAGAATATATGAATATTGATCCCTCTAATACAGAGTGCTTAAGACATTATGATACCTATGAAAAGACCATTTCGGAAATTAATATTGGCCACATTTTGTTCCGGCACTGTCCACCGGACTCTGCAAAACCACAAGGATTTAGTCGAAGAAGAAGATCTCTTTACAACAGTAATCAAGTACTTGAAGAACCGAAGCCACCACTTCCAACTCTTGGCTGTCCAACATATCCATATGTACTTGGTTCCTATTGGCTTAACAATAATCAAGTTCGAGAAGCACTACACATACGTGAGGGAACCATTGGAGAATGGATTAGATGTAACCTTCAAGGTGAATATACTTATGATATTACAAATTCTGTCCCTTATCATGCGAACCTCAGCTCTCGAGGTTGTCGATCTTTGATTTATAGCGGAGATCATGATTTCATGGTACCAACTTTAAACACTCTAACATGGATTAAATCATTAAACTATCCCATCGTGAAAGATTGGAGGCCATGGTTTATCAAAGACCAAGTTGGAGGGTACACAAGAACCTATGCCAATGGAATGACATTTGCCACTATAAAGGGTGGAGGGCACACAGCAGATTATGCACCAGAACCATGTAGCGTTGTTTTCCGCCGTTGGATAACCAATAACTCATTGTAA 1470 40.14 MGVFLYRPTGIYVTYANIDLSPMATLLFRSAVFFLLLLFQLPSSSAGVSSRSVKHLPGFSGPLPFELETGYVGVGEREEIQLFYYFVKSEGNPKNDPLIVWLTGGPGCSSVSGFAFENGPLNFKIEEYNGSLPQLQLNPYSWTKNCSIIFLDSPVGSGFSYGKTLQSLNSGDLTQVHHIHQFVRKWLIEHPEFTSNPFYVGGDSYSGITVPAIAYEILEGNEHILPAINLQGYILGNPVTDTNTNDNYAIPFAHSMTLISDELFESLTSSCKGEYMNIDPSNTECLRHYDTYEKTISEINIGHILFRHCPPDSAKPQGFSRRRRSLYNSNQVLEEPKPPLPTLGCPTYPYVLGSYWLNNNQVREALHIREGTIGEWIRCNLQGEYTYDITNSVPYHANLSSRGCRSLIYSGDHDFMVPTLNTLTWIKSLNYPIVKDWRPWFIKDQVGGYTRTYANGMTFATIKGGGHTADYAPEPCSVVFRRWITNNSL 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1784556 1788284 + MELO3C016829.2.1 Cme07g00274 332290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00274 489 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 43 487 - -
Cme07g00274 489 Gene3D alpha/beta hydrolase 50 489 IPR029058 -
Cme07g00274 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 150 IPR001563 GO:0004185|GO:0006508
Cme07g00274 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 151 161 IPR001563 GO:0004185|GO:0006508
Cme07g00274 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 186 211 IPR001563 GO:0004185|GO:0006508
Cme07g00274 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 457 470 IPR001563 GO:0004185|GO:0006508
Cme07g00274 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 487 IPR001563 GO:0004185|GO:0006508
Cme07g00274 489 Pfam Serine carboxypeptidase 57 486 IPR001563 GO:0004185|GO:0006508
Cme07g00274 489 SUPERFAMILY alpha/beta-Hydrolases 53 486 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00271 Cme-Chr7:1762900 Cme07g00274 Cme-Chr7:1784556 0 dispersed
Cme07g00272 Cme-Chr7:1771535 Cme07g00274 Cme-Chr7:1784556 4.68E-180 dispersed
Cme07g00274 Cme-Chr7:1784556 Cme07g00276 Cme-Chr7:1799520 0 dispersed
Cme07g00273 Cme-Chr7:1775326 Cme07g00274 Cme-Chr7:1784556 0 tandem
Cme07g00274 Cme-Chr7:1784556 Cme07g00275 Cme-Chr7:1792558 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00274 K16296 - cit:102630827 578.941