Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00275 ATGGTCCTTTCCTTCCGCCTCTCCGTTTCCGTTATTGTTCTTCTTCATGTATTCTCCCCCGCCGCCGCTGATTCTCACTGGACGGTGAAGTCTTTGCCGGGATTCTCAGGAGGAGAACTTCCTTTCTCGCTGGAAACTGGATATGTAGGAGTGGGAGATTGGGAGGAATTTCAGTTGTTTTATTATTTTATAAAATCATATTCAAATCCCAAAACGGATCCTCTCATTCTGTGGCTTACCGGAGGTCCTCGTTGCTCTGCTCTCTCCGGTCTCGCCTTTGAAAGTGGTCCAATAAATTTTGAGGGAGAGCTGAAGGAGGGGAGCCTTCCTCAAGTACTCATAAACCCTTACTCATGGACTCAGAACTCCAGTATAATATATCTAGATTTACCGGCGGGCACGGGTTTTTCGTATGCTAAAACCTCAAAAAATCATGAATCAGGAGATCACGAACAAGTTCAACATTGCCTTCAATTTTTGAAAAAGTGGTTCGACGATCATTCAGAATTTATATCTAATCCATTTTATATTGCTGGAAATTCTTATTCTGGTATGATTGTTCCGATGGTTGCTCTAGCAATTTTAGAAGGAACTTACAAACATATTTTTTCATTTATAAATTTCCAGGGATACATATTGGGGAATCCTATCACTACTCCTAATGCAAATAAAAATTTTGAAATTCCATTTGCTCATAATATGGCCCTCATCTCAGATGAATTGTATGAGTCGTTGGAAAGTAGTTGTCAAGGAGAATATGTAAACATCGATCCTAACAATGTGGAGTGCTTAAAACATTACGATACATATACAAAGTGTACTTCTGCAGTTAAAGTTGGATGTATTTTATGGCCCAACTGTCCATCTTTCAAAGAACCAACAACAATGTCCAATCGAAGATCTCTCAACAGTATTTCTGTTACCCGAAGATGTCGTCAATATGACTCCTTACTTGCTTACTATTGGGCCAACAATGACCAAGTTCAAAAAGCACTTCATATACATGAGGGAAGCATTGGAGAATGGATTAGATGTCATGACAAAGAATATTACAATTATGAGTTGGCCAGTGTTTTTCCTTATCACGTGAACCTTAGTTCTAAAGGTTATCGATCGTTAATCTATAGCGGAGATCATGATATGATAGTGGCACATATGGAAACTCATGCATGGATCAAAGCTTTAAATTACTCTATAGTAGATGATTGGAGGCCTTGGTTCATCGAGGATGAAGTTGGCGGGTACACCAGAAGTTTTGCAAATAATATGACATTTGCAACTGTAAAAGGTGGAGGACATACACCAGAATATACACGAGAAGAATCCAGCATACTTTTTAAGAGATGGATAGTGGGAGAATCCTTATGA 1368 39.11 MVLSFRLSVSVIVLLHVFSPAAADSHWTVKSLPGFSGGELPFSLETGYVGVGDWEEFQLFYYFIKSYSNPKTDPLILWLTGGPRCSALSGLAFESGPINFEGELKEGSLPQVLINPYSWTQNSSIIYLDLPAGTGFSYAKTSKNHESGDHEQVQHCLQFLKKWFDDHSEFISNPFYIAGNSYSGMIVPMVALAILEGTYKHIFSFINFQGYILGNPITTPNANKNFEIPFAHNMALISDELYESLESSCQGEYVNIDPNNVECLKHYDTYTKCTSAVKVGCILWPNCPSFKEPTTMSNRRSLNSISVTRRCRQYDSLLAYYWANNDQVQKALHIHEGSIGEWIRCHDKEYYNYELASVFPYHVNLSSKGYRSLIYSGDHDMIVAHMETHAWIKALNYSIVDDWRPWFIEDEVGGYTRSFANNMTFATVKGGGHTPEYTREESSILFKRWIVGESL 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1792558 1796331 + MELO3C016828.2.1 Cme07g00275 332291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00275 455 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 17 453 - -
Cme07g00275 455 Gene3D alpha/beta hydrolase 22 455 IPR029058 -
Cme07g00275 455 Pfam Serine carboxypeptidase 33 451 IPR001563 GO:0004185|GO:0006508
Cme07g00275 455 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 17 453 IPR001563 GO:0004185|GO:0006508
Cme07g00275 455 SUPERFAMILY alpha/beta-Hydrolases 29 452 IPR029058 -
Cme07g00275 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Cme07g00275 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Cme07g00275 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Cme07g00275 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00903 Cme-Chr2:12364157 Cme07g00275 Cme-Chr7:1792558 1.84E-90 dispersed
Cme07g00273 Cme-Chr7:1775326 Cme07g00275 Cme-Chr7:1792558 0 dispersed
Cme07g00275 Cme-Chr7:1792558 Cme02g01050 Cme-Chr2:15384422 2.87E-57 dispersed
Cme07g00274 Cme-Chr7:1784556 Cme07g00275 Cme-Chr7:1792558 0 tandem
Cme07g00275 Cme-Chr7:1792558 Cme07g00276 Cme-Chr7:1799520 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00275 K16296 - csv:101210918 827.78