Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00276 ATGGTCCTTTACTTCCGCCTCTCTTTTTCCATTCTTGTTCTTCTTCATGCATTCTCCGCCGCCGCCGCCGCCGCCGATTCCCACTGGACGGTGAAGTCTTTGCCGGGATTCTCAGGAGGAGAACTTCCTTTCTCGCTGGAAACTGGATATGTAGGAGTGGGAGATCGGGAGGAATTTCAGTTGTTTTATTATTTTATAAAGTCATATTCAAATCCCAAAACGGATCCTCTCATTCTGTGGCTCACCGGAGGTCCTCGTTGCTCTGCTCTCTCCGGTCTCGCCTTTGAAAGTGGTCCAATAAATTTTGAGGGAGAGCTGAAGGAGGGGAGCCTTCCTCAAGTACTCATAAACCCTTACTCATGGACTCAGAACTCCAGTATAATATATCTAGATTTACCGGCGGGCACGGGTTTTTCGTATGCTAAAACCTCAAAAAATCATAAATCAGGAGATTACGAACAAGCTCAACATTGCCTTCAATTTCTGAAAAAGTGGTTCGACGATCATCCAGAATTTATATCTAATCCATTTTATGTTGCTGGAAATTCTTATGCTGGTATGATTGTTCCGGTGGTTGCTCTAGCAATGTTAGAAGTTAAGGTGACAGGTACTTACAAACATATTTTTTCATTTATAAATTTCCAGGGATACATATTGGGGAATCCTATCACTACTCCTAATGCAAATAAAAATTTTGAAATTCCATTTGCTCATAAGATGGCCCTCATCTCAGATGAATTGTATGAGTCGTTGGAAAGTAGTTGTCAAGGAGAATATGTAAACATCGATCCTAACAATGTGGAGTGCTTAAAACATTACGATACATATACAAAGTGTACTTCTGCGGTTGGAGTAGGATGTATATTATGGCCCAAATGCCCATCTTTCGAAGAACCAAAAATGATATCCAATCGAAGATCTCTCAAGAGCATTTCTGTCATCCGAAAATGTCGTCAATATGATTACCTACTTGCTTACTATTGGGCCAACAATGACCAAGTTCAAAAAGCACTTCATATACATGAGGGAAGTATCGAAGAATGGATTAGATGTCGTGACAATGACCATTACAATTATGAGTTGACCAGTGTTTTTCCTTATCACGTGAACCTTAGTTCTAAAGGTTATCGATCATTAATCTATAGCGGAGATCATGATATGGGAGTGGCGCATCTGGAAACTCAAGCATGGATCAAAGCTTTAAATTATTCTATAGTAGATGATTGGAGGCCTTGGTTCATCGAGGATGAAGTTGGCGGGTACACGAGAAGTTTTGCAAACAATATGACATTTGTAACTGTAAAAGGTGGAGGACATACACCAGAATATTCACGAGAAGAATTTAGCATATTTTTTAAGAGATGGATAGTGGGAGAATCCTTATGA 1386 40.12 MVLYFRLSFSILVLLHAFSAAAAAADSHWTVKSLPGFSGGELPFSLETGYVGVGDREEFQLFYYFIKSYSNPKTDPLILWLTGGPRCSALSGLAFESGPINFEGELKEGSLPQVLINPYSWTQNSSIIYLDLPAGTGFSYAKTSKNHKSGDYEQAQHCLQFLKKWFDDHPEFISNPFYVAGNSYAGMIVPVVALAMLEVKVTGTYKHIFSFINFQGYILGNPITTPNANKNFEIPFAHKMALISDELYESLESSCQGEYVNIDPNNVECLKHYDTYTKCTSAVGVGCILWPKCPSFEEPKMISNRRSLKSISVIRKCRQYDYLLAYYWANNDQVQKALHIHEGSIEEWIRCRDNDHYNYELTSVFPYHVNLSSKGYRSLIYSGDHDMGVAHLETQAWIKALNYSIVDDWRPWFIEDEVGGYTRSFANNMTFVTVKGGGHTPEYSREEFSIFFKRWIVGESL 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1799520 1804023 + MELO3C032312.2.1 Cme07g00276 332292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00276 461 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 20 459 - -
Cme07g00276 461 Gene3D alpha/beta hydrolase 24 461 IPR029058 -
Cme07g00276 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Cme07g00276 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Cme07g00276 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Cme07g00276 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Cme07g00276 461 SUPERFAMILY alpha/beta-Hydrolases 31 458 IPR029058 -
Cme07g00276 461 Pfam Serine carboxypeptidase 35 457 IPR001563 GO:0004185|GO:0006508
Cme07g00276 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 20 459 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00274 Cme-Chr7:1784556 Cme07g00276 Cme-Chr7:1799520 0 dispersed
Cme07g00276 Cme-Chr7:1799520 Cme01g02421 Cme-Chr1:32496346 9.77E-57 dispersed
Cme07g00275 Cme-Chr7:1792558 Cme07g00276 Cme-Chr7:1799520 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00276 K16296 - csv:101207623 789.645