Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme07g00295 | ATGAGTTGCAACGGTTGCAGAGTGCTTCGAAAGGGATGCAGCGAAGCTTGTGTTTTAAGGTCAAGTCTTCATTGGATTGATTCCCCGGAAGCTCAAGGCAACGCTACTCTGTTTCTCGCTAAATTTTTCGGCCGTAGTGATCTTTTGTCCTTTATCTCCGCCGTTCCTTATCATCAAAGACCTGCTTTGTTTCAGTCTCTGTTATTCGAAGCTTGTGGTCGCACAGTTAACCCAGTTAGCGGCGCCGTTGGTCTCTTGTCTAGTGGGAACTGGCACGTCTGTCAGGCGGCGGCGGATACCATTCTCAACGGCGGTGTTCTCAGACCAATACCCGGAATCGAAATTTCTGGGAATCCTACGCCTAACCTTGATGATTCATCGTTTACTTTTAATAACGATGTCTGGACAACCACCACACACAATCTTCAATTTTACCCATCTACTCCGTCTGATTTCCGGTGCCTTCCTGATCTCGGTCTCAACAGAACGAAGAAGCATCCGTTGGAGAATCGGCGGTCTCTTGATTCCGAAGAGTCGGTCATGACTAGCTTCGGAAGCGGCGATCTTGGCGAGCAACGGAAAGAAACGAAGCTCTTGAACTTATTCGTGTGA | 612 | 48.37 | MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQRPALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTILNGGVLRPIPGIEISGNPTPNLDDSSFTFNNDVWTTTTHNLQFYPSTPSDFRCLPDLGLNRTKKHPLENRRSLDSEESVMTSFGSGDLGEQRKETKLLNLFV | 203 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1922289 | 1923596 | + | MELO3C016808.2.1 | Cme07g00295 | 332311 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme07g00295 | 203 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 39-LIKE | 1 | 203 | - | - | |
Cme07g00295 | 203 | Pfam | Lateral organ boundaries (LOB) domain | 2 | 99 | IPR004883 | - | |
Cme07g00295 | 203 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 203 | - | - | |
Cme07g00295 | 203 | MobiDBLite | consensus disorder prediction | 166 | 188 | - | - | |
Cme07g00295 | 203 | ProSiteProfiles | LOB domain profile. | 1 | 107 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme07g00295 | Cme-Chr7:1922289 | Cme10g00257 | Cme-Chr10:1686542 | 5.00E-47 | dispersed | |
Cme07g00295 | Cme-Chr7:1922289 | Cme08g00636 | Cme-Chr8:4118183 | 2.07E-66 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
41610 | PF03195 | LOB | 1.60E-23 | No_clan | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme07g00295 | - | - | csv:101208953 | 393.66 |