Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00328 ATGAATAACACGAATTTCGTCTCTAATCCTATGCTTGCTTTGCCATTACTACCTTCTTCATCTCAGTTGTTGTTTTCGAATAACGCCATTGATTTCAATCATAGGGTCTCCATTGTTGTAAAACCCACTTTTCAGGGTTCGTGTAGATGGAGAATCCGAGCCACTGCAGAAAACGGAGCTTCATCGGCGTCGACTTCGCAGATCGATATGGTGAGGAACAGGGAGGGGATTTTCACCGCCAAACAAAGCAAGGTTGTTGTCCTTTGGGACCTTGATAACAAACCCCCTCGTGGGCCTCCGTACGAGGCGGCTATGGCGCTGAAACGAGTGGCGCAACGCTTCGGCCAAGTGGTCGACATGTCGGCTTACGCTAATCGCCATGCCTTTATCCATTTGCCGCAGTGGGTTGTTGAAGAACGCCGCGAGCGTCGGCAATTGGACATTCTTGAGCGCAAAGGGTTGTTCACGCCGTCCGAATCATACGTCTGCGGGGTTTGCGGTCGGAAGTGCAAAACAAACCTAGACCTTAAGAAGCATTTCAAGCAACTTCACGAACGGGAGCGCCAGAAGAAATTGAATAGAATGAGGTCTCTCAAGGGCAAGAAGCGACAGCGTTATAAGGAAAGGTTCGTATCTGGAAATCACAAGTACAATGAAGCAGCGAGGTCTTTGATTACTCCTAAAATTGGATATGGGTTGGCCTCAGAATTGAGACGTGCTGGGGTTTTTGTGAAAACAGTAGAGGATAAGCCTCAGGCAGCTGATTGGGCTTTGAAGAAACAGATGCAACACTCGATGAGTCGTGGTATTGATTGGATGTTTCTTGTTTCTGATGATTCGGATTTCTCGGAGATGTTAAGGAAGGCTAAGGAAGCTAATTTGGGAACTGTGGTGGTGGGAGATCGTGATAGGGCATTGGGTAGGCACGCAGATTTATGGGTTCCATGGATGGGGGTTGAAAATGGGGATGTTACAGAGGAGGATTTGGTGCCCAGAAGATGGAGGATGAGGAGAAGTGACAAGGAAGTGGATGAAGGTGATGATGGCTTTTCAGTTTCTAGTTTCTATGGAGACATTGAGGCTGGTAGCGATTTGGAGAGTGTAGTGGAAGAGCTTGCTTCCGCAAGTACAGAGTTCAATGGGTTAAGAATTTCTGCATTTTCAGAGGGGGAAGATGAAGAAGAAGATGATGATTGGGTTGAAGAGGATGTTGCACCTGACTATCTGCTAGTGATGAGTGACGAGGAAGATGGGTATTTCTGA 1263 47.27 MNNTNFVSNPMLALPLLPSSSQLLFSNNAIDFNHRVSIVVKPTFQGSCRWRIRATAENGASSASTSQIDMVRNREGIFTAKQSKVVVLWDLDNKPPRGPPYEAAMALKRVAQRFGQVVDMSAYANRHAFIHLPQWVVEERRERRQLDILERKGLFTPSESYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRSLKGKKRQRYKERFVSGNHKYNEAARSLITPKIGYGLASELRRAGVFVKTVEDKPQAADWALKKQMQHSMSRGIDWMFLVSDDSDFSEMLRKAKEANLGTVVVGDRDRALGRHADLWVPWMGVENGDVTEEDLVPRRWRMRRSDKEVDEGDDGFSVSSFYGDIEAGSDLESVVEELASASTEFNGLRISAFSEGEDEEEDDDWVEEDVAPDYLLVMSDEEDGYF 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2092105 2093852 - MELO3C016779.2.1 Cme07g00328 332344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00328 420 CDD PIN_LabA-like 171 301 - -
Cme07g00328 420 Gene3D - 78 317 - -
Cme07g00328 420 ProSiteProfiles Zinc finger C2H2 type domain profile. 161 189 IPR013087 -
Cme07g00328 420 PANTHER OS06G0166200 PROTEIN 53 391 - -
Cme07g00328 420 Coils Coil 181 201 - -
Cme07g00328 420 ProSitePatterns Zinc finger C2H2 type domain signature. 163 184 IPR013087 -
Cme07g00328 420 PANTHER - 53 391 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02625 Cme-Chr6:33460565 Cme07g00328 Cme-Chr7:2092105 7.95E-71 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41613 None None None None Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00328 - - csv:101206044 768.844