Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00357 ATGGGTGTAATTTTTCTATCTATTTTGATCTTTTTTCTCAGTCTATTATGGTACATTTCTTTAAAGAGAGACAAGAAGGCAGCCATTAGAGATGGAACTAAGCTCCCTCCTGGTTCTTTAGGATGGCCTTATATTGGAGAAACTCTTCAACTCTATTCTCAACACCCTGATTTTTTTTTCGCTGCGAAACAAAAAAGGTATGGAGAGATTTTTAAGACCCATATACTTGGATGTCCTTGTGTGATGTTGGCTAGTCCTGAGGCAGCGAGATTTGTGTTAGTGACACAAGCTCATTTGTTTAAACCAACTTACCCCAAAAGCAAAGAGCTTTTAATTGGCCCATCTGCCCTGTTTTTTCACCAAGGTGATTACCATTGCCGTCTAAGGAAGCTGGTTCAGAACTCTCTTTCTTTGGATTCCATCCGTACCTTAGTCCCCGATATTGACTCCGTCGCCGCCTCCGCCCTCGACTCCTGGGCCACTTCCGAAGTCATTAACACCTTTCATGAAATGAAAAAGATATCATTTGAAGTTGGGATATTGACCATTTTTGGCCATTTGGAAGCTGCTTACAAAGATGACCTTAAGAAAAACTACAGCATATTGGATGCTGGCTACAATTCTTTTCCCACCAACATTCCTGGAACTCCATACAAAAAGGCACTCTCAGCAAGAAAGAGGCTAAGTAAAATCCTAGGTGACATAATTCATGAGAGGGGAGAAAGAAGGCTGAGAGAAAAGGATTTATTAGGGAGCCTTCTCAATTCCATTGATGATGAATGTGAAGTTAAAATAAGTGATTCCCAAATAGCAGATAACATAATAGGAGTGCTTTTTGCTGCTCAAGACACCACTGCCAGTGTCATGACTTGGATTGTTAAGTACCTCCATGACCAACCCAAGCTTCTTCAATCCCTAAAGGCAGAGCAAGAGGAAATTTTAAAATTAAATAGTGAGAATAATCAAGGATTAAATTGGGTACAGACAAGGAACATGCCAATCACTTATAAGATGGTATTGGAGAGCTTAAGGATGGCTAGCATTATATCATACACTTTTAGAGAGGCTGTAGCTGATGTGGAATACAAAGGATACTTGATTCCAAAAGGTTGGAAAGTGATGCCTTTGTTCCGGAACATCCATCACAGTCCAGAATATTTTCCTGACCCTCACAATTTCGACCCTTCTAGATTTGAGGTTGCACCAAAACCCAATACGTTTATGCCTTTTGGCAGTGGAGTTCATGCCTGCCCTGGAAATGAACTTGCCAAGTTGGAGATCTTGATCATGATTCATCATCTAGTCACCAAGTTCAGGTCAAAACGATTCGTGGGAATTGGTTGGGTCGCAAAACGGGGTTCAGCACAGTCCATTTCCCGTTCCCTTTCAAGGCCTTCCAGCCAGATTTTGGAAGATAGCCCATTAGAAAACCGTACACGGGAATATGAGCCCGCACTAAGTGGGCCGATTGCCGTCCAATCCAAATCCCAGCCAGCCCAGCCCAAGCCCAATACTTGGGCTATCGTTTCAAGAATCCATTTTCTTCTCTCCCCCTTGTCCATCTGTACTCAACGGTTTATATTAGTTTAA 1590 42.08 MGVIFLSILIFFLSLLWYISLKRDKKAAIRDGTKLPPGSLGWPYIGETLQLYSQHPDFFFAAKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTQAHLFKPTYPKSKELLIGPSALFFHQGDYHCRLRKLVQNSLSLDSIRTLVPDIDSVAASALDSWATSEVINTFHEMKKISFEVGILTIFGHLEAAYKDDLKKNYSILDAGYNSFPTNIPGTPYKKALSARKRLSKILGDIIHERGERRLREKDLLGSLLNSIDDECEVKISDSQIADNIIGVLFAAQDTTASVMTWIVKYLHDQPKLLQSLKAEQEEILKLNSENNQGLNWVQTRNMPITYKMVLESLRMASIISYTFREAVADVEYKGYLIPKGWKVMPLFRNIHHSPEYFPDPHNFDPSRFEVAPKPNTFMPFGSGVHACPGNELAKLEILIMIHHLVTKFRSKRFVGIGWVAKRGSAQSISRSLSRPSSQILEDSPLENRTREYEPALSGPIAVQSKSQPAQPKPNTWAIVSRIHFLLSPLSICTQRFILV 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2295995 2298468 + MELO3C016752.2.1 Cme07g00357 332373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00357 529 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00357 529 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00357 529 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00357 529 PRINTS E-class P450 group I signature 417 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00357 529 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00357 529 PRINTS E-class P450 group I signature 407 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00357 529 PANTHER CYTOCHROME P450 26 8 440 - -
Cme07g00357 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 410 419 IPR017972 GO:0005506|GO:0016705
Cme07g00357 529 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 8 440 - -
Cme07g00357 529 Pfam Cytochrome P450 36 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00357 529 Gene3D Cytochrome P450 25 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00357 529 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00357 529 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00357 529 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00357 529 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00357 529 SUPERFAMILY Cytochrome P450 33 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01934 Cme-Chr3:27387176 Cme07g00357 Cme-Chr7:2295995 3.79E-72 dispersed
Cme07g00357 Cme-Chr7:2295995 Cme10g01069 Cme-Chr10:9321685 1.12E-90 dispersed
Cme07g01477 Cme-Chr7:20551212 Cme07g00357 Cme-Chr7:2295995 0 transposed
Cme07g01991 Cme-Chr7:25023185 Cme07g00357 Cme-Chr7:2295995 9.40E-23 transposed
Cme12g00155 Cme-Chr12:1530762 Cme07g00357 Cme-Chr7:2295995 2.16E-153 transposed
Cme01g00047 Cme-Chr1:374836 Cme07g00357 Cme-Chr7:2295995 0 wgd
Cme03g02046 Cme-Chr3:27961732 Cme07g00357 Cme-Chr7:2295995 8.83E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00357 K09843 - csv:101213916 856.284