Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00366 ATGTCCACGAGGAGTGAACATCATACAGTCCCGCTTTCCGTGCTCCTGAAGCGTGAATTGGCGATTGAGAAGATTGAGAGACCGGAAATCGTACATGGTCAGGCGAGTCAGAGTAAGAAAGGGGAGGATTTTACATTACTAAAGACGGAATGCGAGAGAGTGGTCGGAGATGGAGTTTCAACGTATTCGGTTTTCGGGCTTTTTGATGGACATAATGGATCTGCTGCTGCCATTTATGCTAAGGAGAATTTATTGAACAATGTTTTAGCTGCTATTCCATCAGATCTCAACAGAGACGAATGGATTGCAGCATTGCCAAGGGCCTTGGTTGCTGGTTTTGTGAAGACAGACAAAGATTTTCAAGCAAAAGCACAAACATCAGGAACCACAGTCACCTTCATGATCATTGAGGGATGGGTTCTCACTGTTGCCTCTGTTGGAGATTCCCGTTGCACTTTAGAATCATCTGAAGGCGGCATATACTACTTATCTGCAGATCATAGACTAGAAAGCAACGAAGAAGAGAGAGAGCGTATAATTGCTAGTGGTGGTGAGGTGGGTCGGCTGAATACTGGTGGTGGTGCAGAGATTGGTCCATTGAGATGCTGGCCTGGTGGCTTGTGTCTATCACGATCAATCGGTGATATGGATGTTGGCGAGTTTATAGTGCCTGTTCCCTATGTGAAGCAAGTTAAGCTATCTTCTACTGGTGGTAGGGTTATTATTTCAAGTGATGGTGTTTGGGATGCTTTATCAGCTGAAACAGCCTATGATTGTTGTCGGGGGATGCCAGTGGAAACTGCTGCCGCACAGATTGTGAAAGAAGCAGTTCAGTCAAAGGGACTTCGAGATGATACTACATGTATAGTGATTGATGTATTACCAAGGGAGAAACCATCTACTGCTTTGCCACCACCGAAGAAGCAGGTAAAAGGAATGTTTAAATCAATGTTCCGCAAAAGGTCTTCTGAATCATCTTCTCATTTTGAGAGGGAATATAATGAGCCAGATGTTGTCGAGGAATTATTTGAGGAAGGATCGGCTATGCTGTCAGAAAGGTTAGATTCCAAGTATCCAGTCTGCAACATGTTTAAGCTGTTTGTATGTGCAATATGCCAAATTGAGATCCAACCTCGGGAGGGTGTCTCCATATATGCCGGCTCATCTAACCGAGGAAAATTGCGTGCTTGGGATGGACCTTTTCTATGCTTAGGTTGCACAGAGAAGAAAGAAGCTATGGAAGGAAAAAGACCATCTGGAGACACAGCAGCGGAAGTGACTAGCGTACTTTTCAATTACACTTCATTGTGGGTGCACTGA 1320 44.55 MSTRSEHHTVPLSVLLKRELAIEKIERPEIVHGQASQSKKGEDFTLLKTECERVVGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLAAIPSDLNRDEWIAALPRALVAGFVKTDKDFQAKAQTSGTTVTFMIIEGWVLTVASVGDSRCTLESSEGGIYYLSADHRLESNEEERERIIASGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSSTGGRVIISSDGVWDALSAETAYDCCRGMPVETAAAQIVKEAVQSKGLRDDTTCIVIDVLPREKPSTALPPPKKQVKGMFKSMFRKRSSESSSHFEREYNEPDVVEELFEEGSAMLSERLDSKYPVCNMFKLFVCAICQIEIQPREGVSIYAGSSNRGKLRAWDGPFLCLGCTEKKEAMEGKRPSGDTAAEVTSVLFNYTSLWVH 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2363742 2368495 - MELO3C016743.2.1 Cme07g00366 332382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00366 439 CDD PP2Cc 39 293 IPR001932 -
Cme07g00366 439 Pfam Protein phosphatase 2C 52 278 IPR001932 -
Cme07g00366 439 SMART PP2C_SIG_2 46 293 IPR001932 -
Cme07g00366 439 Gene3D - 31 301 IPR036457 -
Cme07g00366 439 ProSiteProfiles PPM-type phosphatase domain profile. 31 293 IPR001932 -
Cme07g00366 439 SMART PP2C_4 17 291 IPR001932 -
Cme07g00366 439 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 424 - -
Cme07g00366 439 PANTHER ALPHABET, ISOFORM E-RELATED 2 424 - -
Cme07g00366 439 SUPERFAMILY PP2C-like 38 293 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00366 Cme-Chr7:2363742 Cme10g00238 Cme-Chr10:1567140 2.70E-175 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00366 - - cmo:103493532 860.907