Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00378 ATGCCTTGGGATAAATCTGAGCTCTGGGTTGGCTACCTTTCTGAGAATGGAGAGGTCTATAAAAGAGTCTGTGTTGCTGGTGGTGATCCGAAGCTTGTGGAATCTCCTACTGAACCAAAGTGGTCAGCTCAGGGAGAACTATACTTTATTACCGATAGACAAACTGGGTTTTGGAATCTCTATAAATGGTTTGAGGCTAACAATGTAGTGGCTCCAATATATTCTTTAAGCGCCGAATTTTCCCGACCCCTATGGGTTTTTGGCACAAACTCTTATGATTTATTAAAGACCGGCGATGGAAGAAACATCATAGTCTGCAGCTACAGACGGCGGGGGCAATCATATCTTGGAGTTTTGGATGAGACGCAAAGCTCAATATCCTTGCTTGATATCCCATTCACAGATATTGAAAATATTGCTCTGGGAAGTGATTGTATATATGTTGAAGGATCTTCAGGACTTCATCCATCATCTATTGCCAAGGTTACCCTAAATGAACGATCCTTGGAAGTAGTAGGCTTCACTATTATCTGGTCATCTTCACCAGATATTTTGAAATTTAAGTCGTACTTCAGCCTTCCTGAGTTCATTGAGTTTCCAACTGAAGTTCCCGGTCAAAATGCTTATGCTTACTTTTATCCACCATCCAACCCTAGATATCAGGCTAGTCCAGATGAAAAGCCTCCACTGTTGTTGAAAAGCCATGGAGGGCCGACTGCTGAAACACGTGGAAGTTTAAATCCTAGTATTCAGTACTGGACTAGTCGTGGATGGGGTTATGTTGATGTCAATTATGGTGGCAGCACGGGTTATGGGCGAGAGTACCGAGAAAGGCTTTTGAGGCGGTGGGGAATTGTTGATGTCAATGACTGCTGCAGTTGTGCAAGATTTTTGGTGGAATCTGGAAAGGTTGATGGAGAACAGTTATGCATCACTGGGGGATCTGCTGGGGGATATACCACCTTAGCTGCTCTTGCTTTTAGAGATACATTTAAGGCAGGAGCTTCCTTGTATGGGATAGCTGACTTACGCTTGTTGAGAGCAGATACACACAAGTTTGAATCTCATTATATTGACAATCTCGTTGGGAATGAAAAAGATTACTTCGACAGGTCACCAATCAATTTTGTTGACAAATTTTCTTGCCCTATAATCCTCTTCCAAGGATTAGAAGACAAAGTCGTACTGCCTAATCAATCGCGTAAGATATATAATGCATTGAAGGAAAAGGGCTTGCCTGTTGCGCTAGTTGAGTATGAAGGAGAACAACATGGTTTCCGCAAGGCAGAAAATATTAAATTTACCCTGGAACAACAAATGATGTTCTTTGCACGAACAGTAGGACGTTTCCAAGTTGCAGACGATATTAACCCGCTCAAAATTGACAACTTCGACTAA 1398 42.2 MPWDKSELWVGYLSENGEVYKRVCVAGGDPKLVESPTEPKWSAQGELYFITDRQTGFWNLYKWFEANNVVAPIYSLSAEFSRPLWVFGTNSYDLLKTGDGRNIIVCSYRRRGQSYLGVLDETQSSISLLDIPFTDIENIALGSDCIYVEGSSGLHPSSIAKVTLNERSLEVVGFTIIWSSSPDILKFKSYFSLPEFIEFPTEVPGQNAYAYFYPPSNPRYQASPDEKPPLLLKSHGGPTAETRGSLNPSIQYWTSRGWGYVDVNYGGSTGYGREYRERLLRRWGIVDVNDCCSCARFLVESGKVDGEQLCITGGSAGGYTTLAALAFRDTFKAGASLYGIADLRLLRADTHKFESHYIDNLVGNEKDYFDRSPINFVDKFSCPIILFQGLEDKVVLPNQSRKIYNALKEKGLPVALVEYEGEQHGFRKAENIKFTLEQQMMFFARTVGRFQVADDINPLKIDNFD 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2446324 2453087 - MELO3C016731.2.1 Cme07g00378 332394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00378 465 SUPERFAMILY alpha/beta-Hydrolases 194 447 IPR029058 -
Cme07g00378 465 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 1 465 - -
Cme07g00378 465 Gene3D alpha/beta hydrolase 187 454 IPR029058 -
Cme07g00378 465 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 1 465 - -
Cme07g00378 465 Pfam Prolyl oligopeptidase family 249 448 IPR001375 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00378 Cme-Chr7:2446324 Cme09g01984 Cme-Chr9:23691780 1.88E-08 dispersed
Cme07g00378 Cme-Chr7:2446324 Cme07g00379 Cme-Chr7:2454593 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00378 - - csv:101211004 938.332