Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00379 ATGGCTTTCTCCGTCTCATCTTCAGTTAGTAACCAACTAGAGAAAATTACTGCACCCTACGGCTCATGGAAGTCTCCGATCACCGCCGACGTTGTGTCCGGCGCCTCCAAGCGAATCGGCGGTGCTGCTGTTGATGGTTCCGGTCGCCTTATCTGGCTTGAATCACGGCCCTCTGAATCTGGGCGGGAAGTTCTTGTCAAGGAACCGGAGAAGCTGGGCGATGAGAATATTGATATTACTCCAAAGGAGTTTTCAGTTCGGACTACTGCACAGGAGTACGGCGGTGGTGCTTTCATGGTGTCTGGTGACACAATAGTCTTCTCTAATTTTGAGGATCAGAGACTGTATAAGCAATCAGTTAAACCCCATGATTCTGCTCCTCGACCCCTTACTCCAGATTATGGTGGACCGTTGGTTAGTTATGCTGATGGAGTGTTTGATTTATGTTTCAATCGTTATATCGCTGTACGGGAAGATCGGCGCATCAGTAGCTCAAGTCCAACTACGACCATTGTATCTATAAGACTCGAAGGGAAGGCTATAGAAGATCCGGAGGTACTTGTTGAGGGAAGTGACTTTTATGCTTTTCCTCGAGTGGATCCCAAAGGGAAACGGATTGCATGGATCCAATGGCATCACCCTAACATGTCATGGGATAAATCAGAGCTTTGGGTTGGTTACTTTTCTGATAATGGCAAAATTAACAAGCGTGTCTGTGTTGCTGGTTGTGAACCAGAGCTAGTGGAATCACCAACTGAGCCTAAGTGGTCCTCTGAGGGAGAACTTTTTTTTGTTACTGATAGGAAAAATGGGTTCTGGAATCTATACAAATGGTTTGAGGCAGACAATGAGGTGTCTCCAGTTTATTCTTTGGATGCGGAGTTTTCACGACCATTTTGGGTTTTTGGCATAAACTCTTATGGTTTTTTATCTGGCAATGAAGGAGAAAACTATATACTATGCAGCTATAGGCAGCATGGGAGGTCATATCTTGGAGTTCTGGGTGATGGACAAAGCTCTCCATCTCTGCTTGATATTCCCTTTTCAGATATTGATAATATTACTATTGGGAACCATTGTTTTTATGTGGAGGGAGCGTCAGCCTTTCATCCACCGTCAATTGCTAAGGTTACTCTAAAAGATAAAAGCTTGAAAGTAGATGAGTTCACTATTATCTGGTCGTCATCGCCTGATATTTTGACATATAAGTCGTACTTCAGTACTCCAAAGTTAATAGAATTTGCAACAGAAGTGCCGGGTGAAATGGCTTATGCCTACTTTTATCCACCATTCAATCCCATTTACCATTCTAGTGGGGATGAAAAGCCTCCATTGTTGCTGGAAAGCCATGGAGGCCCAACGGATGAATCGCGTGGAATATTAAATCTAAGAGTTCAGTATTGGACTAGTCGAGGATGGGCTTTTGTGAATGTTAATTATGGAGGAAGCTCTGGTTACGGGAGGGCATATCGAGAAAGGCTTTTGAGGAAGTGGGGAATTGTTGATGTCAATGACTGTTGCAGCTGTGCAAGATATTTGGTCGATTCAGGTGTAGTTGATGCAGAACGATTATGCATCGCTGGGGAATCTGCTGGGGGATACACTACCCTAGCTGCTCTTGCTTTCAGAGATACATTCAAGGCAGGAGCTTCCTTGTATGGTATAGCTGACTTGCGCATGTTGAGGGCTGAAATGCACAAATTTGAATCTCATTATATTGATAATCTTGTTGGTGTTGAAAGAGACTATTATGAAAGGTCGCCAATTAATTTTGTTGAAAAATTTTCTTGTCCATTAATCTTGTTCCAGGGATTGGATGACAAGGTTGTTCCTCCTAGTCAAGCACGTAAGATCTACCAAGCACTGAAAGAGAAGGGCGTCCATGTGGCTTTAATTGAATATGAAGGAGAACAACACGGCTTTCGTAAGGCCGAGAACATAAAATTCACGTTGGAACAACAAATGCTATTCTTTGCAAGAATGGTCGGACACTTTGAAGTTGCTGATTAG 2010 43.43 MAFSVSSSVSNQLEKITAPYGSWKSPITADVVSGASKRIGGAAVDGSGRLIWLESRPSESGREVLVKEPEKLGDENIDITPKEFSVRTTAQEYGGGAFMVSGDTIVFSNFEDQRLYKQSVKPHDSAPRPLTPDYGGPLVSYADGVFDLCFNRYIAVREDRRISSSSPTTTIVSIRLEGKAIEDPEVLVEGSDFYAFPRVDPKGKRIAWIQWHHPNMSWDKSELWVGYFSDNGKINKRVCVAGCEPELVESPTEPKWSSEGELFFVTDRKNGFWNLYKWFEADNEVSPVYSLDAEFSRPFWVFGINSYGFLSGNEGENYILCSYRQHGRSYLGVLGDGQSSPSLLDIPFSDIDNITIGNHCFYVEGASAFHPPSIAKVTLKDKSLKVDEFTIIWSSSPDILTYKSYFSTPKLIEFATEVPGEMAYAYFYPPFNPIYHSSGDEKPPLLLESHGGPTDESRGILNLRVQYWTSRGWAFVNVNYGGSSGYGRAYRERLLRKWGIVDVNDCCSCARYLVDSGVVDAERLCIAGESAGGYTTLAALAFRDTFKAGASLYGIADLRMLRAEMHKFESHYIDNLVGVERDYYERSPINFVEKFSCPLILFQGLDDKVVPPSQARKIYQALKEKGVHVALIEYEGEQHGFRKAENIKFTLEQQMLFFARMVGHFEVAD 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2454593 2460765 - MELO3C016729.2.1 Cme07g00379 332395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00379 669 Pfam Prolyl oligopeptidase family 463 663 IPR001375 GO:0006508|GO:0008236
Cme07g00379 669 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 7 669 - -
Cme07g00379 669 SUPERFAMILY DPP6 N-terminal domain-like 101 324 - -
Cme07g00379 669 SUPERFAMILY alpha/beta-Hydrolases 418 662 IPR029058 -
Cme07g00379 669 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 7 669 - -
Cme07g00379 669 Gene3D alpha/beta hydrolase 401 666 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00514 Cme-Chr5:4727587 Cme07g00379 Cme-Chr7:2454593 1.78E-20 dispersed
Cme07g00379 Cme-Chr7:2454593 Cme09g01984 Cme-Chr9:23691780 4.26E-12 dispersed
Cme07g00378 Cme-Chr7:2446324 Cme07g00379 Cme-Chr7:2454593 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00379 - - csv:101221995 1324.69