Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00393 ATGGCGGTTGTTACTGATCCCCTTGCTTCTATGCAACTTCTCGCCAATACCCTTCCAGCTCCGCCGTATGCGGCCGCCGCCGTTCTGGGTGGCGTCTCTTTGGTGCTTTCTGTGTTTCTTGTTGCTGATTGTAGAAAGAAACGTCGGAATTTTCTCCCTCCGGTGCCGGCGGTCCCGGGGGTTCCGTTGTTGGGGAATCTGTTGCAGTTGAAGGAGAAGAAGCCTCACAAGACATTTGCTCGATGGGCCGAGACGTACGGTCCGGTTTATTCAATAAGAACCGGCGCTTCCACTGTGATTGTTCTCAACACCACAGAGGTTGCCAAAGAGGCTATGGTGACGAGGTATGGTTCGATTTCGAGTCGAAAGCTAAGCAAAGCTCTTACAATCTTGACTGCTGATAAGTGTATGGTTGCTATGAGTGATTACAATGAGTTTCACAAGATGGTGAAGAGATATATATTGGCTAATGTGTTGGGGGCTAATGCTCAGAAGAAACACAGACAAAGGAGAGACGCCATGATCGAGAATATTTCTAGGGAGTTGTTTGCTCATGTGAAGGAGTTTCCATCAGACACTGTTAATTTTCGGAAGATCTTCGAATCCGAACTCTTTCGTCTCGCGCTTAAAGAAACGCTTGGGAAGGATATTGAGTCGATATACGTCGATGGGCTCGGTACGACATTGCCGAGGGAAGATCTGTTTAGGATTTTAGTGATTGATCCAATGGAGGGTGCGATTGAGGTTGATTGGAGGGATTTCTTCCCATATTTGAGATGGATTCCAAACAAGAGTGTGGAGAATAAAATAAGGAATATGGATTTTCGAAGGCGAATGACAATGAAGAGCCTAATCCAGGAGCCGAAGAGACGAATTGCAGCAGGGGAGGAGACGAATTGCTATGCCGATTTCTTGTTATCTGAAGCGAAAACACTTACCGAGGATCAAATATCCATGTTGCTTTGGGAGACGATCATTGAAACTTCCGACACAACTCTAGTTGTAACAGAGTGGGCTATGTATGAACTTTCAAAAGATCCAAAACGACAGGACTATCTATATCAGCAAATACAGAGTGTTTGTGGATCTTCAACGCTTACTGAAGAAAACTTGTCACAGCTTCCATATCTGACTGCTATTTTTCATGAAACTCTTCGGAAGCATAGTCCGGTCCCAGTCGTCCCATTACGGTATGCGCATGAAGACACCCAGTTAGGCGGGTACTTTGTTCCTGCAGGGAGTGAGATCGCTGTGAACATTTACGCGTGCAACATGGACAAGAATCATTGGGAAAACCCTGAGGAATGGAAGCCAGAGAGGTTTCTGGATGAGAAGTATGATCCAATGGATTTGCACAAAACCATGGCCTTTGGAGGAGGGAAGAGGGTGTGTGCAGGTGCTCTCAAGGCAATGCTGATAGCTTGCACAACCATTGGAAGAATGGTTCAAGAGTTTGAGTGGAAGCTGAGAGAAGGAGAAGAGGAGAAGGTCGACACTCTTGGCCTCACCGCTCGCAAGCTCCAGCCACTGCACGTAGTCATAAAACCGAGAAACAACTAA 1560 46.54 MAVVTDPLASMQLLANTLPAPPYAAAAVLGGVSLVLSVFLVADCRKKRRNFLPPVPAVPGVPLLGNLLQLKEKKPHKTFARWAETYGPVYSIRTGASTVIVLNTTEVAKEAMVTRYGSISSRKLSKALTILTADKCMVAMSDYNEFHKMVKRYILANVLGANAQKKHRQRRDAMIENISRELFAHVKEFPSDTVNFRKIFESELFRLALKETLGKDIESIYVDGLGTTLPREDLFRILVIDPMEGAIEVDWRDFFPYLRWIPNKSVENKIRNMDFRRRMTMKSLIQEPKRRIAAGEETNCYADFLLSEAKTLTEDQISMLLWETIIETSDTTLVVTEWAMYELSKDPKRQDYLYQQIQSVCGSSTLTEENLSQLPYLTAIFHETLRKHSPVPVVPLRYAHEDTQLGGYFVPAGSEIAVNIYACNMDKNHWENPEEWKPERFLDEKYDPMDLHKTMAFGGGKRVCAGALKAMLIACTTIGRMVQEFEWKLREGEEEKVDTLGLTARKLQPLHVVIKPRNN 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2552204 2555763 - MELO3C016719.2.1 Cme07g00393 332409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00393 519 SUPERFAMILY Cytochrome P450 53 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00393 519 Gene3D Cytochrome P450 45 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00393 519 Pfam Cytochrome P450 57 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00393 519 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00393 519 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00393 519 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00393 519 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00393 519 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00393 519 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00393 519 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00393 519 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 24 518 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Cme07g00393 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00393 Cme-Chr7:2552204 Cme04g02123 Cme-Chr4:28556816 2.21E-61 dispersed
Cme07g00393 Cme-Chr7:2552204 Cme12g01642 Cme-Chr12:23549666 2.67E-45 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00393 K04122 - csv:101209283 957.977