Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00428 ATGTCGTTTGTTAAAGATACGATTTCAGTTCCCACGGTAATGATAATAAGTATTGTTTTATTATTGTTGTTGTTGGGATGGAAATTAGTTGATTGGATTTGGTTCCGGCCGAAGAGGTTAGAGAGGGTCTTAAGACGGCAAGGTTTCGCCGGAAATTCATACCGGATTCTCCACGGGGACTTGAAGGAGAGTGCGGCCATGAGAGAGGAAGCAATGTCCAAGCCCATGAAGTTTTCCAATCACATTGCTCCACGTGTCATTCCTTCCGTCTATCATACCATCCAACTTTATGGGAAGAATTCATTCATGTGGATTGGGACAATGCCAAGAGTGCACATAATGGACCCAGAACAACTCAAAACTGTGTTCTCATTAATCAATGATTTCCAAAGGCCAACTATGAGTCCTCTTCTCAAGTTGTTTGCAAATGGACTTTTCAGTTATGAAGGACAAAAATGGGTCAAACATAGAAAGATAATCAGCCCTGCATTTCATTTAAAGAAGCTTAAGGATATGATACCAGAATTCTATCACAGTAGTAACGAGATGGTTGGCAAGTGGGAAAGCATGATCTCTAGAGAGGGATCTTGTGAATTAGATGTAATGCCTTATCTACAAAATATGGCTTCGGATGTGATTTCTCGAACTGCATTTGGTAGTAGCTATGAGAAAGGAAAAAAGATCTTCGAGCTTCAATCTGAATTAGGTGCCTTGGTGATTCAATCTAGCTTAGGAATATATATTCCAGGATGGAGATTTCTACCTACAAAGTCAAACAGGAAAATGAAAGAGTTAAGTAAAAAGATATCAACTTTGATATTGGGTGTTATGAATGAAAAGGAAAAGTCTATGAAAGCAGGTGAAGCAATACAAACTGATCTACTAAGCATTCTCATAGAATCCAATTTGGATGAAATTAAAGATCATAGAAACAATAAAGGCATGGGATTGAGCATACAAGATATTATTGATGAATGCAAGCTTTTCTATATTACTGGCCAAGAAACTACAGCAACATTACTAATTTGGACGATGGTATTGTTGAGTTCATATTCAAAATGGCAAGAGCGAGCAAGAGCGGAGGTCTTTGAGATCTTTGGCAACAAAAAACCAGATTATGATGGTTTAAGTCGGCTAAAAGTTGTGACTATGATCTTCAATGAGGTTCTCAGGTTATACCCACCTGTAAGTATGTATGCTCGTACTGTGAATAAAGAAACAAAACTTGGAAAATTGACTTTACCAGCCGGAGTGATGTTGAGCTTACCAATTATTCTTATCCAAACCGATCCTGAGTTATGGGGACAAGATGCATATGAATTTAATCCAGATAGATTTTCAGAAGGTGTTTCTAAAGCAACAAAAAATCCATTTGCTTTTGTACCATTTGGCTGGGGCCCTAGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCAAAAATGGCATTGTCAATGATCCTACAACGCTTCTCATTTGAGCTTTCACCATCATATACACACACTCCTCATACAGGTTTAACAACACAGCCTCAACATGGAGCTCATATCATACTACACAAACTCTAG 1569 38.18 MSFVKDTISVPTVMIISIVLLLLLLGWKLVDWIWFRPKRLERVLRRQGFAGNSYRILHGDLKESAAMREEAMSKPMKFSNHIAPRVIPSVYHTIQLYGKNSFMWIGTMPRVHIMDPEQLKTVFSLINDFQRPTMSPLLKLFANGLFSYEGQKWVKHRKIISPAFHLKKLKDMIPEFYHSSNEMVGKWESMISREGSCELDVMPYLQNMASDVISRTAFGSSYEKGKKIFELQSELGALVIQSSLGIYIPGWRFLPTKSNRKMKELSKKISTLILGVMNEKEKSMKAGEAIQTDLLSILIESNLDEIKDHRNNKGMGLSIQDIIDECKLFYITGQETTATLLIWTMVLLSSYSKWQERARAEVFEIFGNKKPDYDGLSRLKVVTMIFNEVLRLYPPVSMYARTVNKETKLGKLTLPAGVMLSLPIILIQTDPELWGQDAYEFNPDRFSEGVSKATKNPFAFVPFGWGPRICIGLNFAMIEAKMALSMILQRFSFELSPSYTHTPHTGLTTQPQHGAHIILHKL 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2828340 2832491 + MELO3C016686.2.1 Cme07g00428 332444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00428 522 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00428 522 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00428 522 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00428 522 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00428 522 SUPERFAMILY Cytochrome P450 85 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00428 522 Pfam Cytochrome P450 95 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00428 522 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 519 - -
Cme07g00428 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Cme07g00428 522 Gene3D Cytochrome P450 82 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00428 522 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00428 522 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00428 522 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00428 522 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00428 522 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00428 522 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00428 522 PANTHER CYTOCHROME 17 519 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00428 Cme-Chr7:2828340 Cme10g00343 Cme-Chr10:2235242 3.70E-142 dispersed
Cme07g00430 Cme-Chr7:2845604 Cme07g00428 Cme-Chr7:2828340 8.30E-40 dispersed
Cme07g00426 Cme-Chr7:2812123 Cme07g00428 Cme-Chr7:2828340 0 proximal
Cme07g00428 Cme-Chr7:2828340 Cme07g00429 Cme-Chr7:2834102 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00428 - - csv:116401659 952.199