Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00497 ATGCCTGGGAATAAGTATAACGGTAACTCAAACGATAGTTCAGACCGTATACCAGGTCGACTGGAAAGGCTCTTGCGCGAGAGAAAGCTAAGGAAAAGCTCTAAGGATTCATATTCAAACGAGTTAAACGACTACAGTAAGGAGTCTGAACCAATTGATAATGACCTTCGTTTGAAAGAAGAAGAAAGCGTTGGAATTCCCTGCAAATTTTCCGAAGCTTCTATATCCTCAAGGACCTTTGGCGAAGGATGTGACAAGCAAGATGGCAAGCCACCCAGACAACGGTTGCTGGTTGTGGCCAATAGGTTGCCCGTCTCTGCAGTTAGGAGGGGTGAAGATTCCTGGTCTCTAGAGATCAGTGCTGGAGGCCTAGTGAGTGCACTTCTGGGCGTGAAGGAATTTGAGGCGAGATGGATTGGTTGGGCTGGTGTAAACGTACCCGATGAGGTGGGACAGAAGGCACTGACTGAAGCTTTGGCTGAAAAGAGGTGTATCCCTGTTTTCCTTGATGAAGAGATTGTTCATCAATACTACAATGGCTATTGTAACAACATTTTATGGCCTCTGTTTCATTACCTTGGCCTTCCTCAAGAAGATCGTCTTGCCACCACCCGCAGCTTTCAGTCTCAGTTTGCCGCATACAAGAAGGCAAACCAAATGTTTGCTGATGTAGTTAACAAGCACTATGAGGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTCCTTCCTAAATGTCTCAAGGAACATAATCGCAAGATGAAAGTCGGCTGGTTTCTCCATACACCTTTTCCCTCCTCTGAAATCCACAGAACCCTTCCATCCCGATCAGAGCTTCTGCGCTCAGTACTTGCTGCTGATCTGGTTGGTTTTCACACATATGATTATGCGCGTCATTTCGTAAGTGCTTGTACTCGTATTCTTGGACTTGAGGGTACACCAGAAGGAGTTGAGGACCAAGGAAAGCTAACACGAGTGGCTGCATTTCCCATTGGTATCGACTCGGACCGATTCATACGTGCCCTTAAGATACCTGAAGTCCAAGTACATATTGAAGAGTTAAAGGAAAGATTCAAAGGTCGAAAGGTAATGTTAGGGGTTGATCGTCTTGATATGATTAAAGGAATACCTCAAAAGATATTAGCATTTGAAAAATTCTTGGAGGAAAACCCTTATTGGCGTGATAAAGTTGTTTTGCTGCAAATTGCAGTGCCAACAAGAACAGATGTGCCAGAATGTATGATATTAGTGATGGAATATAATGCTCTCTCAAATCTTGTATCATTGCCTCATTTCAATGCTTGGTTCGATGATCAAGATCGCTCCCTCGATTTTCATGCACTGTGTGCGCTATATGCTGTCACTGATGTAGCACTTGTCACATCTTTGAGGGATGGAATGAATCTTGTCAGTTATGAATTTGTTGCTTGCCAGGATGCAAAGAAAGGGGTTCTAATTCTTAGCGAGTTTGCGGGTGCTGCACAATCCCTGGGTGCTGGAGCACTTTTGGCCAACCCCTGGAACATAACAGAAGTTGCAAAATCAATTGATCGAGCATTAAATATGGGTGCTGAAGAAAGAGAAAAACGCCATAGGCATAATTTTCTCCATGTGACTACACACACTGCTCAGGAATGGGCAGAAACTTTTGTGAGTGAACTTAACGATACGGTCGTTGAAGCTGAACTAAGGATTCGACAATGTCCGCCCCCGCTTCCATTTGATAATGCAATTAAACATTATGAGCAATCTACTAATAGATTACTTATACTGGGGTTCAATTCAACATTAACTGAACCCGTGGACACACCTGAGAGAAGAGGTGATCAGATTAGAGAAATGGATCTGAAACTACACCCAGATTTGAAAGAACCATTGACAGCAATTTGCAATGACCCAAATACGACAGTAGTCATTCTCAGTGGGAGTGACAGAACTGTCTTGGATGATAATTTTGGGGAGTATGACATGTGGTTGGCTGCTGAGAATGGAATGTTTCTACGTTTCACAAGGGGGGACTGGATGACTACAATGCCTGAGCATTTGAATATGGAATGGGTCGACAGTGTGAAGCATGTGTTTGAGTACTTCACAGAGAGAACTCCCCGTTCCCATTATGAGCTCCGGGAAACTTCTCTTGTTTGGAACTATAAATATGCAGATGTTGAGTTTGGAAGGCTTCAAGCAAGGGATATGCTACAGCATTTATGGACAGGTCCAATTTCTAATGCATCAGTTGATGTTGTTCAAGGTAGCCGATCCGTCGAGGTGCGAGCTGTTGGTGTTACCAAGGGATCAGCAATTGACCGAATATTGGGAGAAATAGTTCACAGCAAGTCCATGACGACTCCAATAGACTATGTCTTGTGTGTAGGCCATTTTCTTGGGAAGGATGAAGATGTCTACACTTTCTTTGAGCCAGAACTTCCATCGGATACTATAGGCATGCCAAGAGCCAAGGGAACCGATGGACTTAAGTTAACGGGTGAGAGAAAGCCTTCCATCAAAGTTCCTCTAAATAGGAATGGATCAAAATCACCTCACAATAAGGGTCGGTTGGAGAAGAAAACTTCAAATCATAACTGTGCAAACGGTCGTAAACCATCACCGGAGAAGATCCAATGGAATGTGCTTGATCTCAAGGCTGAGAACTACTTCTCTTGTGCTGTTGGACGAGCTCGAACGAATGCTCGGTATCTGCTCGGATCATCAGATGAAGTGGTGGCATTCCTAAAGGAGTTGGCAGATGAAATGGCATCAGATTATTTCAACGAGATTGGAGGGTTGGAGTTGTAA 2802 43.86 MPGNKYNGNSNDSSDRIPGRLERLLRERKLRKSSKDSYSNELNDYSKESEPIDNDLRLKEEESVGIPCKFSEASISSRTFGEGCDKQDGKPPRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTEALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEHNRKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFIRALKIPEVQVHIEELKERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPYWRDKVVLLQIAVPTRTDVPECMILVMEYNALSNLVSLPHFNAWFDDQDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDAKKGVLILSEFAGAAQSLGAGALLANPWNITEVAKSIDRALNMGAEEREKRHRHNFLHVTTHTAQEWAETFVSELNDTVVEAELRIRQCPPPLPFDNAIKHYEQSTNRLLILGFNSTLTEPVDTPERRGDQIREMDLKLHPDLKEPLTAICNDPNTTVVILSGSDRTVLDDNFGEYDMWLAAENGMFLRFTRGDWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHYELRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGSAIDRILGEIVHSKSMTTPIDYVLCVGHFLGKDEDVYTFFEPELPSDTIGMPRAKGTDGLKLTGERKPSIKVPLNRNGSKSPHNKGRLEKKTSNHNCANGRKPSPEKIQWNVLDLKAENYFSCAVGRARTNARYLLGSSDEVVAFLKELADEMASDYFNEIGGLEL 933
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4052377 4069970 - MELO3C025673.2.1 Cme07g00497 332513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00497 933 MobiDBLite consensus disorder prediction 849 863 - -
Cme07g00497 933 Gene3D - 682 762 - -
Cme07g00497 933 MobiDBLite consensus disorder prediction 16 54 - -
Cme07g00497 933 MobiDBLite consensus disorder prediction 1 15 - -
Cme07g00497 933 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 25 919 IPR001830 GO:0003824|GO:0005992
Cme07g00497 933 CDD HAD_TPP 590 810 - -
Cme07g00497 933 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 94 560 - -
Cme07g00497 933 PANTHER BNAA02G18920D PROTEIN 25 919 - -
Cme07g00497 933 CDD GT20_TPS 95 557 IPR001830 GO:0003824|GO:0005992
Cme07g00497 933 Pfam Trehalose-phosphatase 615 813 IPR003337 GO:0003824|GO:0005992
Cme07g00497 933 Gene3D Glycogen Phosphorylase B; 342 541 - -
Cme07g00497 933 SUPERFAMILY HAD-like 589 917 IPR036412 -
Cme07g00497 933 Pfam Glycosyltransferase family 20 95 557 IPR001830 GO:0003824|GO:0005992
Cme07g00497 933 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 95 557 IPR012766 GO:0003825|GO:0005992
Cme07g00497 933 MobiDBLite consensus disorder prediction 817 870 - -
Cme07g00497 933 MobiDBLite consensus disorder prediction 1 54 - -
Cme07g00497 933 Gene3D - 616 776 IPR023214 -
Cme07g00497 933 Gene3D Glycogen Phosphorylase B; 87 341 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00497 Cme-Chr7:4052377 Cme12g01248 Cme-Chr12:20614503 0 dispersed
Cme07g00497 Cme-Chr7:4052377 Cme10g00508 Cme-Chr10:3271116 3.26E-128 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00497 K16055 - csv:101204478 1756.11