Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00502 ATGTTATCGTCTAAAAACCTCTTTGTTTCTTTCTTTTGTTTCTTCTTCATTGTTGGAATACATTCTCAGTCCACTAGATTGCCTTTTCATGAAGTGGAAGCTTTAAAGGAAATAGGAAAGAGTTTGGGAAAAAGAGACTGGAATTTCAGTGTTGATCCTTGTAATGGATCCCACGGATGGATATCTCAACCCAACCAAATTCCTTACAATGTTGCTGGTTTTGAAAATAATCTCACTTGTGATTGCACCTTTCTTAATGCTACAGTCTGCCATGTCATCAGCATAGTTCTCAAATCGCAGAGCCTTCAAGGCACTCTCCCACCTCATCTTGTGCGTTTGCCGTTTTTGCAGCAAATTGATCTTACTCGGAACTATCTCAGCGGCCAAATTCCTCCAGAATGGGGCTCTACGAATCTCTTACCTTCTTGGAAATCGGTTGACGGGTTTGATTCCAGAGGAGATTGGGAATATCACTACTCTGGAGAATTTGGTCCTGGGAATCAATCAGCTGTCAGGAAGCATTCCTCAGGCGCTAGGAAATTTGCCCCAGATACAGAGATTACATCTTACATCAAACAACTTTTCTGGAGAGTTGCCAATGTCACTGGGAAAGCTGACCACATTGAAGGAATTGGTATTGAGAAGTTGCAACATCTCTGGAAGGCTGCCCAACTATCTGGACAGGATGCCATCATTGAAAATCTTGTCAGTACTCAAGACCTCAGCTTTAACAGTCTAAGTGGACGAATTCCAACCAGATTTGATGCTCTTAAAGGGTTGGATAACATACTTTTAACTGGAAACATGCTAAATGGATCGGTGCCTGATTGGATGTTGAAAGGGAATGGCATTCAGTGTTGCTGGGGAAAGTTGCCGGTCCCAAAAAGTGAAGAAACCATAAATGGAACTACAGTTTTTAAAGGAGACCGAAATGCGGGCAGCTCTATGTTTTTTGTCACTGGAACAAATTGGGCAATCAGCAACACTGGTATTTTTTTGGATGATGATGGTGCCTCTCGAGATGAATACACCGCAACAAATTCTTCTACTCTTTCTATGATAAATCCTGAACTGTATACTACTGCTCGTGTTTCTCCATTATCTGTTACTTACTTTGGGTTCTGTATGGGAAATGGAAACTACACTGTAAGCCTCCATTTTGCAGAGATAATGTTTACTGATGACAAGACATTCAGTAGTCTCGGCAGACGCATATTTGATGTTTATCTTCAGAAAAAGCTGGTGCTAGAGAATTTCAATATTGTGGATGCAGCAGGTGGCGTAGGTAAAGCAGTCATTAAAAAATTCCCAGTTACTGTGGTGAATGGAACTGTGGAGATCCGCTTCTATTGGGCAGGGAAGGGGACGAATGCCATCCCTGTGAGTGGAGTCTATGGTCCTCTTATATCCGCCATTTCAGTAGATCCTGACTTTGAACCTCCATTTGATGGTGGAGGAACTGGGAAATCTGGTATACCTGTAGGTGCAGTGATCGGCATCGCAGCTGCTGCGGCTTTTGTTGTATTATTGGCCGTTGGAATCCTGTGGTGGAGCATATGCCTACGACGTGAAAGGACACTTGAACAAGAGTTACGAGGTTTGGACTTGCACACTTGCTCTTTTACATTAAGGCAAATAAAAGTTGCCACAAACAACTTTGATGCCACCAATAAGATTGGAGAAGGTGGTTTCGGTCCTGTCTATAAGGGTGTTCTTGCGGATGGCACAACAATTGCAGTAAAGCAACTGTCTTCTAAATCAAAGCAAGGAAATCGTGAATTCGTGAATGAGATTGGCATGATATCTGCTTTGCAACACCCACATCTAGTCAAGCTTTATGGATGTTGTATTGATGGGAATCAGCTTCTGTTAGTATATGAATACATGGAAAACAATAGCCTTGCCCATGCCTTGTATGGTCAAGAAGAAAGTGAATTAGAATTGGATTGGTCAACAAGACAAAAGATCTGTGTTGGTATAGCAAGAGGTATGGCTTATCTTCATGAAGAGTCAAGACTAAAGATTGTCCACCGAGACATCAAAGCTACTAATATTCTGTTAGACAAAGATCTAAACCCCAAGATATCTGACTTCGGCTTGGCCAAACTTGATGAAGAAGAAAATACTCATATAAGTACTCGAATTGCTGGAACTTTTGGATACATGGCGCCAGAATATGCTATGCAAGGACACTTAACTGATAAAGCAGATGTTTATAGTTTTGGAGTTGTAGCTTTAGAAATTGTTAGCGGAAGGAGCAACACCACTTTATGGGCAGCTAACGATTGCTCTTATCTTCTAGACTCGGCACTGAAGTTTAAAGAAAAGAACAGTTTATTGGAGCTAGTTGATCCAAGGTTAGGCTCCAACTTCAATGAAGGAGAGGCACTGAGAATGATCAAAATTGCTCTCCACTGCACTAATGTCTCTCCTGCAGCAAGGCCTAACATGTCATCAGTAGTGAGCATGTTGGAAGGCAGGCAGGAAATTGAGGACGTAGTGTCAAATCCAAGCGTCACTAAAGAAGCAAGAAATGCAGCATGGACTCGATTGTTGCAAGACGACGAGCAATCTAATAATGCAAACCAGAAGCATGGTCTGTTTGCTAATGTTTCGACAACAGGTTCTTCAACCTCTGGAAGCGATCTCTATCCGATCAGCAAAAACATAGATTTGGCTTATTTGATGGCTTGCACTGTAGAATTGGTTTCTAAAAACGGTGATCTGATGAGTGAGTGTTCTGAAGTCCAAAATCTTTTCAGATTGAAAGTCATTCCTCGCCCATTTCCTGGTTCAGAGAGAATTAAATAA 2811 41.73 MLSSKNLFVSFFCFFFIVGIHSQSTRLPFHEVEALKEIGKSLGKRDWNFSVDPCNGSHGWISQPNQIPYNVAGFENNLTCDCTFLNATVCHVISIVLKSQSLQGTLPPHLVRLPFLQQIDLTRNYLSGQIPPEWGSTNLLPSWKSVDGFDSRGDWEYHYSGEFGPGNQSAVRKHSSGARKFAPDTEITSYIKQLFWRVANVTGKADHIEGIGIEKLQHLWKAAQLSGQDAIIENLVSTQDLSFNSLSGRIPTRFDALKGLDNILLTGNMLNGSVPDWMLKGNGIQCCWGKLPVPKSEETINGTTVFKGDRNAGSSMFFVTGTNWAISNTGIFLDDDGASRDEYTATNSSTLSMINPELYTTARVSPLSVTYFGFCMGNGNYTVSLHFAEIMFTDDKTFSSLGRRIFDVYLQKKLVLENFNIVDAAGGVGKAVIKKFPVTVVNGTVEIRFYWAGKGTNAIPVSGVYGPLISAISVDPDFEPPFDGGGTGKSGIPVGAVIGIAAAAAFVVLLAVGILWWSICLRRERTLEQELRGLDLHTCSFTLRQIKVATNNFDATNKIGEGGFGPVYKGVLADGTTIAVKQLSSKSKQGNREFVNEIGMISALQHPHLVKLYGCCIDGNQLLLVYEYMENNSLAHALYGQEESELELDWSTRQKICVGIARGMAYLHEESRLKIVHRDIKATNILLDKDLNPKISDFGLAKLDEEENTHISTRIAGTFGYMAPEYAMQGHLTDKADVYSFGVVALEIVSGRSNTTLWAANDCSYLLDSALKFKEKNSLLELVDPRLGSNFNEGEALRMIKIALHCTNVSPAARPNMSSVVSMLEGRQEIEDVVSNPSVTKEARNAAWTRLLQDDEQSNNANQKHGLFANVSTTGSSTSGSDLYPISKNIDLAYLMACTVELVSKNGDLMSECSEVQNLFRLKVIPRPFPGSERIK 936
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4150769 4161487 - MELO3C025668.2.1 Cme07g00502 332518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00502 936 ProSitePatterns Serine/Threonine protein kinases active-site signature. 675 687 IPR008271 GO:0004672|GO:0006468
Cme07g00502 936 Pfam Protein tyrosine and serine/threonine kinase 556 824 IPR001245 GO:0004672|GO:0006468
Cme07g00502 936 Gene3D Ribonuclease Inhibitor 200 285 IPR032675 -
Cme07g00502 936 Gene3D Ribonuclease Inhibitor 31 147 IPR032675 -
Cme07g00502 936 Gene3D Transferase(Phosphotransferase) domain 1 629 840 - -
Cme07g00502 936 Gene3D Phosphorylase Kinase; domain 1 518 628 - -
Cme07g00502 936 Pfam Malectin domain 334 472 IPR021720 -
Cme07g00502 936 Gene3D - 296 476 - -
Cme07g00502 936 SUPERFAMILY Protein kinase-like (PK-like) 538 826 IPR011009 -
Cme07g00502 936 CDD STKc_IRAK 559 826 - -
Cme07g00502 936 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 298 870 - -
Cme07g00502 936 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 79 140 - -
Cme07g00502 936 SMART serkin_6 553 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00502 936 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 298 870 - -
Cme07g00502 936 SUPERFAMILY L domain-like 89 279 - -
Cme07g00502 936 ProSiteProfiles Protein kinase domain profile. 553 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00502 936 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 79 140 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00502 Cme-Chr7:4150769 Cme07g00510 Cme-Chr7:4228632 0 dispersed
Cme07g00502 Cme-Chr7:4150769 Cme07g00504 Cme-Chr7:4173782 1.53E-122 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65000 PF07714 PK_Tyr_Ser-Thr 3.50E-51 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00502 - - csv:101220843 1178.7