Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00509 ATGGTTGGAACTTGGGACATGGATTTGTCTGGTTGGAATTTTTTGAGAAATGTTCGTGTTCTTGTTTTGGGAGTTCTTGTTTTGAACTGCTACTTGAGATTTGGATCCGATGCACAACCGTTGCCTGAACAAGAAGTGAGAGCTCTTCAAGCAATATCTACTCAACTAAGGAACTTAAACTGGAATGTTAACCAAAATTCTTGCATTAACGGTGATGGGTTTTCCAATAGAGCCATCCTTGGTACTGATATTATCAGAGAGGTTAATTGCACTTGCACCACCACTGTTTGCAGAGTCACTAGCATCCGGCTAAAGGGTCTGAATCTAACTGGAACTCTGCCAGCAGCATTTGCAAATCTGACTCAGCTCCAAAAAATAGATCTTACTCGCAACTTAATTTCTGGATCAATCCCTAAAGAGTTTGCTCAAATTCCTCTTGTTGATCTGTCTATGTTGGGAAATCGTCTCAATGGCCAAATTCCTCCAGAAATTGGTGACATTGCTACACTTGAGCATTTGGTTTTGGAAGACAATCTCCTTGAAGGGAATCTTCCTGAGAGTCTCGGGCGACTGAGCCGCTTGCAAAGATTACTTCTTTCTGTAAACAATTTCAATGGAACAATTCCAATATCTTATGGAAACTTGAGGAACTTGACTGATTTTCGGATAGATGGAAATGATGTATCAGGAAGGCTTCCTGAATTTATTGGCAATTGGACTAAACTTGTGAGACTGGATATACAAGGAACTTCAATGGAGACCCCTATTCCTAGAGGCATATCTGACTTGAAAAACTTAACCCAATTGAGGATAACTGATTTGAAGGGACTCCCAACAAGTTTTCCCAATTTGACTCAATTGACATCTTTAGAAGAACTGGTTCTAAGAAATTGCTTAATCCGGGATCAGATTCCTGAATACATTGGACTGTTTAGTAGTTTAAAAACTTTAGATCTAAGCTTCAATGAGTTGAGTGGTCCAATTCCAGTTACATTTCAGAATCTAGACAGAGTTACTCAGTTTTTGTTTTTGACCAACAACTCATTAAGTGGCCAAGTACCAAGCTGGATCTTGAATAGTGAAAGGAGCATAGATTTATCTTACAACAATTTTACAGGGTCCCCTGTTTCAAGTTGTCAACAGTCTGATGTGAACTTGGTTTCAAGTTATTCAACTACAATGAATGAAACTGTTTCTTGGTGCTTGAGGAAGGATCTCCCTTGCCCAAGAGAAAATCGATTTCATTCCTTGTTCATAAATTGTGGAGGACAAAGGATGGAGGTTGATGGTAATGAATATGAAGAGGATGCAACTCCAGGTGGAAAATCCAATTTCCTTTCTTTCTCTGATAGATGGGGTTATAGCAGTACTGGTGTTTTCTTGGGAGATGAGAATGCTAATTACAGAGCAATAAGTACCAATTCATCAATCCCGAACATCTACCAAACCGCTCGACTCGCACCTCTTTCGCTGAAGTACTATGGACTTTGCTTAAGAAGAGGAAGCTACAATGTGAAGCTTCACTTTACTGAAATAATGTATACATCTGATCAAACATTCAGCAGCTTGGGAGAGCGCATATTTGATATCTCTATTCAAGGAAAATTGGTTCAAAAAGATTTTAACATAATGGAGAAAGCTGGTGGTGTTGGGAAAACCTTTATTCTAGAAGAGTCTAATATTTTGGTAAATGGAAGTACTCTTGAGATTCATTTATATTGGGCTGGGAAAGGAACTACTGCTATTCCAGACAGAGGGGTGTATGGGCCTTTGATATCTGGCATTACAGTCACACCAAACTTTGATGTGGAGCCTGGAACGATATCAGCTGGAGCTATTGCTGGGATTGTTGTTGGTAGTTTTGTGTTTGTTGTGTTGGTATTGGCTGTTCTTAGATGGAAAGGTTATTTGGGTGGAAAGGAGACTGAAGACAGTGAGTTGAAGGCCCTAGATTTACAGACAGGTTATTTCAGTTTGAGACAAATCAAAACAGCCACCAACAACTTCGACCAGACATATAAGATAGGCGAGGGAGGTTTTGGTCCTGTCTACAAGGGTGTACTTTCGGATGGTACTCCGATTGCAGTAAAGCAACTATCCGCTAAATCAAGACAGGGAAACCGTGAATTCGTCACTGAGATTGGCATGATATCTGCATTACAACATCCAAATCTTGTTAAGCTTTATGGTTGTTGTATAGAAGGAAACCAGTTATTGCTTGTTTATGAGTATCTAGAGAATAATAGTCTTGCTCGTGCACTTTTCGGCGCCGAGGAGCACCGACTGCACTTGGATTGGCCGACACGGATGAAGATATGCTTGGGAATTGCTAAGGGATTGGCTTACCTTCATGAAGAATCTGTCTTGAAAATTGTTCATAGAGATATTAAAGCTACCAATGTGTTACTTGATAAAAATTTGAATGCCAAGATTTCTGACTTTGGATTGGCTAGGCTTGATGAAGAGGAGAACACTCATATCAGCACAAGAATTGCTGGCACAATAGGTTACATGGCTCCTGAATATGCAATGCGAGGCTACTTAACTGATAAAGCAGATGTCTATAGCTTCGGAGCGGTGGCTTTGGAGATTGTTAGTGGAAAAAGTAACACAAACTACCGACCAAAAGAAGAATTTGTTTATCTTCTCGACTGGGCCTATGTTCTACAAGAGCAAGGAAACCTCCTCGAACTCGTTGATCCAAGTCTCGACTCACATTACCCGAAAGAAGAGGTGATGCGGATGATTAATATAGCTCTGTTATGCACAAATCCATCTCCAACTCTTAGGCCGTCAATGTCTTCGGTGGTTAGTATGCTTGAAGGCAAAATTGCGGTCCAAGCACCTATCATAAAGCGAGACGCAGTCGATCAAGAAGCGCGGTTCAAAGCGTTTGAAAGGCTTTCACACGATAGCATAACAAGCATTTCAACGTCATCACAAGGGATTCCAATGCAAAAAAGTATGTTGCTTGATGGACCATGGGCTGATTCCACCACTTCTACTCAAAACAAGGATGAAACTCAACATTATTCTTCAACCAGAAACCTCCTTTAG 3057 40.5 MVGTWDMDLSGWNFLRNVRVLVLGVLVLNCYLRFGSDAQPLPEQEVRALQAISTQLRNLNWNVNQNSCINGDGFSNRAILGTDIIREVNCTCTTTVCRVTSIRLKGLNLTGTLPAAFANLTQLQKIDLTRNLISGSIPKEFAQIPLVDLSMLGNRLNGQIPPEIGDIATLEHLVLEDNLLEGNLPESLGRLSRLQRLLLSVNNFNGTIPISYGNLRNLTDFRIDGNDVSGRLPEFIGNWTKLVRLDIQGTSMETPIPRGISDLKNLTQLRITDLKGLPTSFPNLTQLTSLEELVLRNCLIRDQIPEYIGLFSSLKTLDLSFNELSGPIPVTFQNLDRVTQFLFLTNNSLSGQVPSWILNSERSIDLSYNNFTGSPVSSCQQSDVNLVSSYSTTMNETVSWCLRKDLPCPRENRFHSLFINCGGQRMEVDGNEYEEDATPGGKSNFLSFSDRWGYSSTGVFLGDENANYRAISTNSSIPNIYQTARLAPLSLKYYGLCLRRGSYNVKLHFTEIMYTSDQTFSSLGERIFDISIQGKLVQKDFNIMEKAGGVGKTFILEESNILVNGSTLEIHLYWAGKGTTAIPDRGVYGPLISGITVTPNFDVEPGTISAGAIAGIVVGSFVFVVLVLAVLRWKGYLGGKETEDSELKALDLQTGYFSLRQIKTATNNFDQTYKIGEGGFGPVYKGVLSDGTPIAVKQLSAKSRQGNREFVTEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYLENNSLARALFGAEEHRLHLDWPTRMKICLGIAKGLAYLHEESVLKIVHRDIKATNVLLDKNLNAKISDFGLARLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGAVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLDSHYPKEEVMRMINIALLCTNPSPTLRPSMSSVVSMLEGKIAVQAPIIKRDAVDQEARFKAFERLSHDSITSISTSSQGIPMQKSMLLDGPWADSTTSTQNKDETQHYSSTRNLL 1018
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4206076 4215960 - MELO3C025664.2.1 Cme07g00509 332525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00509 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672|GO:0006468
Cme07g00509 1018 PANTHER - 77 302 - -
Cme07g00509 1018 PANTHER - 388 1003 - -
Cme07g00509 1018 PANTHER - 304 359 - -
Cme07g00509 1018 CDD STKc_IRAK 675 942 - -
Cme07g00509 1018 Pfam Protein tyrosine and serine/threonine kinase 673 940 IPR001245 GO:0004672|GO:0006468
Cme07g00509 1018 Gene3D Ribonuclease Inhibitor 42 273 IPR032675 -
Cme07g00509 1018 Pfam Malectin domain 417 595 IPR021720 -
Cme07g00509 1018 ProSiteProfiles Protein kinase domain profile. 669 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00509 1018 MobiDBLite consensus disorder prediction 990 1018 - -
Cme07g00509 1018 SUPERFAMILY Protein kinase-like (PK-like) 653 949 IPR011009 -
Cme07g00509 1018 Gene3D Ribonuclease Inhibitor 274 399 IPR032675 -
Cme07g00509 1018 Gene3D - 415 600 - -
Cme07g00509 1018 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 304 359 - -
Cme07g00509 1018 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 388 1003 - -
Cme07g00509 1018 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 77 302 - -
Cme07g00509 1018 MobiDBLite consensus disorder prediction 993 1018 - -
Cme07g00509 1018 SUPERFAMILY L domain-like 85 336 - -
Cme07g00509 1018 Gene3D Transferase(Phosphotransferase) domain 1 745 960 - -
Cme07g00509 1018 SMART serkin_6 669 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00509 1018 Gene3D Phosphorylase Kinase; domain 1 637 744 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00509 Cme-Chr7:4206076 Cme07g01343 Cme-Chr7:18904904 0 dispersed
Cme07g00503 Cme-Chr7:4167408 Cme07g00509 Cme-Chr7:4206076 6.34E-11 proximal
Cme07g00509 Cme-Chr7:4206076 Cme07g00510 Cme-Chr7:4228632 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65002 PF07714 PK_Tyr_Ser-Thr 3.60E-50 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00509 - - csv:101222014 1868.2