Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00510 AAAGAGATTAAATTCAGTTTTCATTTCATCCTTTCCTCAGTTTCCTCTCTCTCCTCTTCGGTACTCTTTACATCCAAATCCCACCGTCGTCGAGCGATGCTGTTGCCTCGGTTTCTCGCCGTTGTTTTCCTCTCATATTCTCTCTGCTTTTCCATAACCTTCACTTCCGCCGCCACTCGGCTGCCGCCCGACGAAGTGGATGCATTGGAGGAAATCGGAAGAACATTAGGGAAGACGGACTGGGATTTCACGGCGGATCCATGCGGCGGCGTTGCTAGTGGTTGGATATCGAAATCGAATCAATTCGATACTAATTTTGATAATAACGTCACTTGCAAATGCAACTTCCAAAATAATACCGTCTGTCACGTCACTAACATTCTTCTCAAGGCGCAGAGCCTTCAAGGTACTCTGCCACCGCAAATTGTGAGGTTGCCTTTCCTTGAAGAACTTGATCTTACCCGCAACTATCTCAGCGGTCCAATTCCTCCAGAATGGGGTTCAACCAAGATTCTCAAAATTTCCCTTCTTGGAAATCGATTGACAGGTCCAATCCCAAAAGCGATTGGAAACATCACCACTCTTCAAGAGTTGGTTTTGGAAATGAATCATTTCTCTGGAAATATACCTCTAGAACTTGGGAATTTGGCCAACTTATCAAGATTACTTCTTACCTCCAACAACTTTTCTGGGGAGCTCCCATCTTCACTGGCTAGGATAACGACATTAACGGATTTTCGAATTGGTGACAATAACTTTAGAGGACCAATACCTACGTTTCTTCAGAATTGGACGAATCTTGGAAAAATAGCTATTCAGGCAAGCGGGTTGAGTGGGCCAATTCCTTCTGAAATTGGACTTTTGACAAAATTAACTGATGTGAGAATCAGTGACTTGAATGGAGGTTCATCGCGATTTCCACCACTTAGTACTTTGACAAAGTTGAGAACCCTGATATTAAGGAGTTGCAATATAACTGGGATGCTGCCTGACAATCTTGCTGGGTTGACAGCCTTGAAAACATTAGACTTTAGTTTCAACAAAATTACTGGACCGATACCTCTCAGCTTTGAAGCGTTGAAAAAAGTAGAGAGCATATTTCTTGCTGGAAACTTGCTAAATGGATCAGTGCCCAATTGGATGCTAAATCAAGGAAAAAGCATTGATCTCTCTTATAACAAATTTACTCAGAACACTGGTTGCCAATCACGAAATTTAAACCTATTTGCAAGCTCTTCTCAGGACAATAATTCTGGAACAGTTTCATGTTTAGGCTCCTGTCAAAAAACATGGTACTCTGTCCATATCAACTGTGGCGGGAAAGAAGAATTGATCAACGGAACAACCAAATTTGATGCAGACACAAACACTGGAACATCATCAGTGTTTTCTCAAGGTGGAAGCAATTGGGGATATAGCAACACTGGTACTTTTATGGACGATGATCGCTCACCAGATGATTTTATTGCATTAAACTTATCTGCTCTCTCGATGCCAAATCCTGAATTGTACGTCAGGGCACGCATTTCTCCAATCTCTCTTACCTATTATGCATATTGCTTGGGTACTGGAAACTACACATTAAGTCTCCATTTTGCTGAGATAGCATTTACTAATGATGAAACATATAGAAGCCTTGGCAGACGCTTATTTGATGTCTATGTTCAGGGAAAGCTGGAGTTGAAGGATTTTAATATTGCAGATGCTGCAGGTGGAATTGGCAAACCTTTTGTAAAGAAATTCACAGTTTCTGTGACTAATGGTACTATAGAAATCCGCCTATTTTGGGCTGGGAAGGGGTCAAATGCAATCCCTGTAAGAGGAGTTTATGGTCCTTTAATTTCTGCCATTTCTGTTGATCCTGACTTTGAGCCACCATCAGAAGGTGGAAATGCCATTTCTGCCGGTGCAGTGGCTGGAATTGTGGTTGCCGTGGTCTTTGTTATCCTCTTGGTTCTTGGAGTGCTGTGGTGGAGAGGCTGTCTAAGAAAGCCAAGCACACTCGAGCAAGAGTTGAAGGGTCTAGATCTTGGAACAGGTTCATTTTCATTAAGACAAATCAGAGATGCCACTAACAATTTTGATGCTGCCAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTTCAAGGGTGTTCTTGCAGATGGCACCATAATTGCAGTGAAACAACTTTCTTCCAAATCAAAGCAAGGAAATCGTGAATTTGTGAATGAGATAGGCATGATATCTGCATTGCAGCACCCTCATCTAGTGAAGCTTTATGGATGTTGTATTGAAGGAAATCAACTTTTGCTAATATATGAGTATCTTGAAAACAATAGCCTTGCTCGAGCCTTATTTGGACCTGCAGAATCTCAATTGAAATTGGATTGGCCAACTAGGCAAAAGATTTGTGTTGGTATAGCCAGAGGTTTAGCATACCTTCATGAGGAGTCAAGACTTAAGATCGTTCACCGGGACATCAAAGCTACCAATGTTCTGCTCGATAAAAATCTGGATGCCAAGATTTCTGACTTTGGTTTGGCCAAGCTGGACGAAGAAGAAAATACACATATCAGCACTAGGGTTGCTGGAACATTTGGGTATATGGCACCAGAATATGCCATGCGCGGCTACTTAACTGACAAGGCAGACGTGTACAGCTTTGGCATTGTAGCATTGGAGATAGTTAGTGGTCGAAGCAACACAAGTTTTCGAACAAAGGATGATTGCTTTTACCTTCTTGACCATGCTAATACTTTAAAAGAGAAAGACAGTTTATTAGAGCTTGTAGACCCACGGTTAGGTTCTGATTTCAACAAGAGAGAGGCAATGGCAATGATCAATATTGGCCTCCAATGCACAAACGTCATTGCTGCCGACAGACCAGCCATGTCATCGGTGGTGAGCATGTTGGAGGGGAAGGTTGCGGTGAAGGAGGTGGTTTCAGATCCCAGCATGTCAAAACAAGATGTGAATGCAATGTGGAGCCAGATTTATCGCCAGAAAGGGCAAATGACGAGCGAGAGCCAGACGCAAAGTTTGACAATGGATGGACCTTGGACTGGTTCTTCAACAACTGCCAGCGATCTCTATCCCATCAACATGGATTCTAAATTCTTGGAGAATAGGAACTAG 3117 42.51 KEIKFSFHFILSSVSSLSSSVLFTSKSHRRRAMLLPRFLAVVFLSYSLCFSITFTSAATRLPPDEVDALEEIGRTLGKTDWDFTADPCGGVASGWISKSNQFDTNFDNNVTCKCNFQNNTVCHVTNILLKAQSLQGTLPPQIVRLPFLEELDLTRNYLSGPIPPEWGSTKILKISLLGNRLTGPIPKAIGNITTLQELVLEMNHFSGNIPLELGNLANLSRLLLTSNNFSGELPSSLARITTLTDFRIGDNNFRGPIPTFLQNWTNLGKIAIQASGLSGPIPSEIGLLTKLTDVRISDLNGGSSRFPPLSTLTKLRTLILRSCNITGMLPDNLAGLTALKTLDFSFNKITGPIPLSFEALKKVESIFLAGNLLNGSVPNWMLNQGKSIDLSYNKFTQNTGCQSRNLNLFASSSQDNNSGTVSCLGSCQKTWYSVHINCGGKEELINGTTKFDADTNTGTSSVFSQGGSNWGYSNTGTFMDDDRSPDDFIALNLSALSMPNPELYVRARISPISLTYYAYCLGTGNYTLSLHFAEIAFTNDETYRSLGRRLFDVYVQGKLELKDFNIADAAGGIGKPFVKKFTVSVTNGTIEIRLFWAGKGSNAIPVRGVYGPLISAISVDPDFEPPSEGGNAISAGAVAGIVVAVVFVILLVLGVLWWRGCLRKPSTLEQELKGLDLGTGSFSLRQIRDATNNFDAANKIGEGGFGPVFKGVLADGTIIAVKQLSSKSKQGNREFVNEIGMISALQHPHLVKLYGCCIEGNQLLLIYEYLENNSLARALFGPAESQLKLDWPTRQKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLDAKISDFGLAKLDEEENTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNTSFRTKDDCFYLLDHANTLKEKDSLLELVDPRLGSDFNKREAMAMINIGLQCTNVIAADRPAMSSVVSMLEGKVAVKEVVSDPSMSKQDVNAMWSQIYRQKGQMTSESQTQSLTMDGPWTGSSTTASDLYPINMDSKFLENRN 1038
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4228632 4239619 + MELO3C025663.2.1 Cme07g00510 332526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00510 1038 CDD STKc_IRAK 700 967 - -
Cme07g00510 1038 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 326 394 - -
Cme07g00510 1038 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 415 1007 - -
Cme07g00510 1038 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 326 394 - -
Cme07g00510 1038 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 415 1007 - -
Cme07g00510 1038 Pfam Malectin domain 433 617 IPR021720 -
Cme07g00510 1038 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 112 325 - -
Cme07g00510 1038 Gene3D Ribonuclease Inhibitor 77 227 IPR032675 -
Cme07g00510 1038 Gene3D Ribonuclease Inhibitor 300 415 IPR032675 -
Cme07g00510 1038 SUPERFAMILY L domain-like 118 396 - -
Cme07g00510 1038 Gene3D Phosphorylase Kinase; domain 1 662 769 - -
Cme07g00510 1038 Gene3D Ribonuclease Inhibitor 228 299 IPR032675 -
Cme07g00510 1038 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 112 325 - -
Cme07g00510 1038 ProSiteProfiles Protein kinase domain profile. 694 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00510 1038 Gene3D - 430 621 - -
Cme07g00510 1038 Pfam Leucine rich repeat 314 373 IPR001611 GO:0005515
Cme07g00510 1038 Gene3D Transferase(Phosphotransferase) domain 1 770 981 - -
Cme07g00510 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Cme07g00510 1038 Pfam Protein tyrosine and serine/threonine kinase 697 964 IPR001245 GO:0004672|GO:0006468
Cme07g00510 1038 SMART serkin_6 694 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00510 1038 MobiDBLite consensus disorder prediction 1000 1022 - -
Cme07g00510 1038 SUPERFAMILY Protein kinase-like (PK-like) 678 987 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00309 Cme-Chr5:2296795 Cme07g00510 Cme-Chr7:4228632 0 dispersed
Cme07g00502 Cme-Chr7:4150769 Cme07g00510 Cme-Chr7:4228632 0 dispersed
Cme07g00504 Cme-Chr7:4173782 Cme07g00510 Cme-Chr7:4228632 1.16E-128 dispersed
Cme07g00510 Cme-Chr7:4228632 Cme12g01256 Cme-Chr12:20676044 0 dispersed
Cme07g00512 Cme-Chr7:4257093 Cme07g00510 Cme-Chr7:4228632 1.74E-97 dispersed
Cme07g00508 Cme-Chr7:4194523 Cme07g00510 Cme-Chr7:4228632 6.79E-17 proximal
Cme07g00509 Cme-Chr7:4206076 Cme07g00510 Cme-Chr7:4228632 0 tandem
Cme07g00510 Cme-Chr7:4228632 Cme07g00511 Cme-Chr7:4240156 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65003 PF07714 PK_Tyr_Ser-Thr 3.20E-47 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00510 - - csv:101221782 1810.42