Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00511 ATGGCTCAATTCCTCGCCGTATTTCTTTTCTTCTCTCTCGTCTACGCCGCTGCTCGGCTGCCGGCTGACGAAGTTGAGGCGTTGAGGGAGATCGGAAAAACGTTAGGGAAGGCGAATTGGAGTTTCAAGACGGATCCCTGCGGCGGTGAGAACGGCGGTTGGATAACAATTTCTATGGAATTGGGGTTTGTTAATAATCTCACATGTGACTGCAGTTTCCAGAATCACAAAGTTTGTCACGTCACTAAAATACGTCTAAGGTCACAGAACCTTCCGGGTACTCTGCCACCACAAATAGCGAAGCTGCCTTACTTGGAAGAACTTGATCTTGCCCGTAACTATCTCAGTGGACCAATTCCTCCAGAATGGGGTCTCACAAAGCTTGTCAACCTTTCCGTTCTTGGAAATCAATTGACGGGTCCAATTCCTAAAGAGATTGGAAACATCAGCACTCTTAAAGAGTTGGTCCTTGAAGTTAATCAGTTTTCTGGAAGTCTACCTCAAGAACTTGGAAACTTGAAGAACTTAAAAAGATTACTTGTTTCCTCAAACAAATTTACTGGGGAGCTCCCATCATCACTGGGAAAGATAACCACAATGACGGATTTTCGAATTAGTGATAATCACTTCACAGGATCAATACCTAACTTCATTCGGAATTGGCCAAAGCTTCAAAAACTAGCTATTCAGGCAAGTGGGCTGAGTGGACCAATTCCTCCTGAAATTGGACGTTTGACATTATTAGATGATCTGAGAATCAGTGACTTGAATGGAGGTTCATCGCCATTTCCACCGGTTAATATTTTAGAAAACTTGAAAACCCTGATATTGAGGAGTTGCAATATAATTGGGATGCTGCCTCCCAGGCTTAATGGATTGGAAAACACGAAAACCATAGACTTCAGCTTCAACAAACTTACTGGACCAATACCTCCCGGCTTTGAAGCTTTGAAAAAAGTGGATAGAATATTTTTAACTGGAAACATGCTAAGTGGAGCTGTGCCTCGTTGGATGCTTGAGGAGGGAGAAAACATTGATCTCTCTTATAACAAATTTACCCAGACAGATTTTCAGGCCACTGGATGTGAAGCAAGAAGCGTAAACCTGTTCGCGAGCTCTGCACAAGACATTAGTCCTGGAACAGTTTCATGCTTAGCGGGCTCTTGTGATAAAACTTGGTACTCTCTCCATATCAATTGCGGTGGGAAGGAAAATTTAATAAACGGAACAGTCAGGTATGATGGAGACACAAACACAGGCAAATCATCATTGTTTTTTCAAGGTGGAGCTAATTGGGGATTTAGCAACACTGGTAGTTTTATGGACGATGATCGCTCAACTGATGACTTTATTTCATCAAGTTCACCTGAACTCCCAATGAAAGGTCTTGAATTGTACACGAGTGCACGGATTTCTCCAATCTCTCTTAGTTATTATGCATATTGCATGGGTAATGGAAAATACTCATTAAGCCTCCATTTTGCTGAGATAGACTTCGGTATTGGCAGAACATACAAAAGCCTTGGCAGACGCATATTTGATATCTACGTTCAGAGACAGCTGGTGTTGAAGGATTTTAATATTGCAGAGGAAGCAGGTGGTGTTGGCAAACCTCTTATAAAGAAATTTCCTGTTTCTATTACTAATGGTACTGTAGAGATCCGCTTCTTTTGGGCTGGGAAGGGGACAAATTCAATCCCTTCAAGAGGAACTTATGGTCCTCTAATTTCAGCCATTTCTCTTGAACCTGACTTTGATCCACCAACAGAAGGTGGAAGTGCCATATCTGCTGGTGTAGTGGTTGGAATTGTGGCTGCTGTGGTCTTTTTTATCATCTTGCTTCTTGGAGTTTTGTGGTGGAGAGGCAGCCGAAGAAAGAAAAGCACACTTGAACAAGAGTTAAAGGACCTCGATCTAGGAACAGGATCATTTTCATTAAGACAAATTAAAGCTTCTACTAACAATTTTGATGTTGCCAATAAGATCGGGGAAGGTGGTTTTGGTCCTGTTTATAAGGGCGTTCTTAACGATGGCAGTGTAATTGCAGTGAAGCAACTTTCTTCAAAGTCAAAGCAAGGAAATCGTGAATTTTTGAATGAGATAGGCATGATATCTGCATTGCAGCACCCTCATCTAGTGAAGCTTTATGGATGTTGTATTGAAGGAGATCAACTTTTGCTAATCTACGAGTATCTGGAAAATAATAGCCTTGCTCGTGCCTTATACGGACCTGAGGAATATCAACTAAAATTGGATTGGCCAACAAGGCAGAAGATTTGTGTTGGTATTGCTAAAGGTTTAGCATATCTTCATGACGAGTCAAGACTAAAGATCGTTCACCGAGATATCAAAGCTACCAATGTTCTTCTCGATAAAAATCTAAACCCTAAGATTTCCGACTTTGGTTTGGCCAGGCTGGATGACGAAGGAAACACACACATCAGCACACGGGTTGCTGGAACCTATGGATATATGGCTCCAGAATACGCAATGCGAGGCTACTTAACTGATAAAGCAGATGTTTACAGCTTTGGCGTGGTGGCATTAGAAATTGTGGGTGGTAGAAGCAACACAAGTTTTGGAACCAAGGAAGATTGCTTATACCTTCTTGACTATGCTAATCTTTTAAAAGTAAGAGGGAATTTACTAGACCTTGTCGATCCACGGTTAGGCTCTAATTTCGACAAGGCAGAGGCAATGACGATGATCAATATCGCTCTCCAATGCACGGACATCAGTGCTGCAGATAGACCATCAATGTCAACAGTAGTTGGGATGTTGGAAGGGAAAATTGTTGTGGAGGAGTTGGTTTCAGATCTCAATGTCTCAAAGCAAGATGTGAATGCAATGTGGAGCCAGATTTACCGCAAGAAAGGGAAGACGATGAGCGAGACGCAAAGTATGATGACATGTGAGAGCGAGAGCGAGAGCGAGACACAAAGTATGTTGATGGATGGACCATGGACTGATTCTTCAATTGCTGACAGTGATAGCCATCCCCATCATGTTAATATTGACACGGAATCTTTCTTTTAA 3036 42.13 MAQFLAVFLFFSLVYAAARLPADEVEALREIGKTLGKANWSFKTDPCGGENGGWITISMELGFVNNLTCDCSFQNHKVCHVTKIRLRSQNLPGTLPPQIAKLPYLEELDLARNYLSGPIPPEWGLTKLVNLSVLGNQLTGPIPKEIGNISTLKELVLEVNQFSGSLPQELGNLKNLKRLLVSSNKFTGELPSSLGKITTMTDFRISDNHFTGSIPNFIRNWPKLQKLAIQASGLSGPIPPEIGRLTLLDDLRISDLNGGSSPFPPVNILENLKTLILRSCNIIGMLPPRLNGLENTKTIDFSFNKLTGPIPPGFEALKKVDRIFLTGNMLSGAVPRWMLEEGENIDLSYNKFTQTDFQATGCEARSVNLFASSAQDISPGTVSCLAGSCDKTWYSLHINCGGKENLINGTVRYDGDTNTGKSSLFFQGGANWGFSNTGSFMDDDRSTDDFISSSSPELPMKGLELYTSARISPISLSYYAYCMGNGKYSLSLHFAEIDFGIGRTYKSLGRRIFDIYVQRQLVLKDFNIAEEAGGVGKPLIKKFPVSITNGTVEIRFFWAGKGTNSIPSRGTYGPLISAISLEPDFDPPTEGGSAISAGVVVGIVAAVVFFIILLLGVLWWRGSRRKKSTLEQELKDLDLGTGSFSLRQIKASTNNFDVANKIGEGGFGPVYKGVLNDGSVIAVKQLSSKSKQGNREFLNEIGMISALQHPHLVKLYGCCIEGDQLLLIYEYLENNSLARALYGPEEYQLKLDWPTRQKICVGIAKGLAYLHDESRLKIVHRDIKATNVLLDKNLNPKISDFGLARLDDEGNTHISTRVAGTYGYMAPEYAMRGYLTDKADVYSFGVVALEIVGGRSNTSFGTKEDCLYLLDYANLLKVRGNLLDLVDPRLGSNFDKAEAMTMINIALQCTDISAADRPSMSTVVGMLEGKIVVEELVSDLNVSKQDVNAMWSQIYRKKGKTMSETQSMMTCESESESETQSMLMDGPWTDSSIADSDSHPHHVNIDTESFF 1011
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4240156 4249668 + MELO3C025662.2.1 Cme07g00511 332527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00511 1011 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 69 969 - -
Cme07g00511 1011 ProSiteProfiles Protein kinase domain profile. 656 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00511 1011 Gene3D Ribonuclease Inhibitor 37 189 IPR032675 -
Cme07g00511 1011 Gene3D Ribonuclease Inhibitor 190 261 IPR032675 -
Cme07g00511 1011 Gene3D Ribonuclease Inhibitor 262 365 IPR032675 -
Cme07g00511 1011 CDD STKc_IRAK 662 929 - -
Cme07g00511 1011 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 69 969 - -
Cme07g00511 1011 MobiDBLite consensus disorder prediction 991 1011 - -
Cme07g00511 1011 SUPERFAMILY Protein kinase-like (PK-like) 640 935 IPR011009 -
Cme07g00511 1011 Gene3D - 393 583 - -
Cme07g00511 1011 Gene3D Phosphorylase Kinase; domain 1 620 731 - -
Cme07g00511 1011 SUPERFAMILY L domain-like 65 336 - -
Cme07g00511 1011 Gene3D Transferase(Phosphotransferase) domain 1 732 943 - -
Cme07g00511 1011 SMART serkin_6 656 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00511 1011 Pfam Protein tyrosine and serine/threonine kinase 658 926 IPR001245 GO:0004672|GO:0006468
Cme07g00511 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Cme07g00511 1011 Pfam Malectin domain 395 579 IPR021720 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00503 Cme-Chr7:4167408 Cme07g00511 Cme-Chr7:4240156 1.15E-21 dispersed
Cme07g00508 Cme-Chr7:4194523 Cme07g00511 Cme-Chr7:4240156 6.39E-17 dispersed
Cme07g00511 Cme-Chr7:4240156 Cme12g01256 Cme-Chr12:20676044 0 dispersed
Cme07g00510 Cme-Chr7:4228632 Cme07g00511 Cme-Chr7:4240156 0 tandem
Cme07g00511 Cme-Chr7:4240156 Cme07g00512 Cme-Chr7:4257093 1.42E-92 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65004 PF07714 PK_Tyr_Ser-Thr 6.00E-47 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00511 - - cmo:103501834 1949.1