Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00770 ATGGGCTTCTATACGGTAAAATGGCAATGGCTACTGATTCTTCACATTGTACCGCTCTGCTTGATAATGAGCAGAAGCAGTGGTATCACTTCTGATGGTGAGGCACTTTTGAGCTTCAGAGCATCAATTCTTGATTCTGATGGTGTTCTTCTTCAATGGAAGCCAGAGGAACCCCATCCTTGTAAATGGAAAGGAATAACGTGTGATCCAAAAACCAAGAGAGTGATATATTTGAGTCTTCCTTATCACAAACTTAGTGGATCGTTATCCCCTGAACTTGGAAAGCTTGACCACCTAAAAATTTTAGCTCTTCATGACAATAACTTTTATGGGACAATTCCATCAGAATTAGGGAATTGCTCACAATTGCAGGGAATGTTCCTGCAGGGTAATTACTTTAGTGGGTTCATTCCCAATGAATTAGGGAATCTTTGGGCACTTAAAAATTTAGATATTTCAAGTAACTCACTCGGCGGAAATATTCCCATTTCACTGGGGAAGTTGAGCAATCTTATTAGTCTAAACGTGTCTGCCAATTTTCTGGTTGGAACAATTCCAAATGTTGGCATGCTACTCAACTTCTCGGAAAGCTCATTTCTTGGAAACCGTGGCTTGTGTGGGAAACAAATAAATGTTATGTGCAAAGATGACAAAAAGGAACCTGAGACTAATGAGTCGCCATTCTCAGTGCAAAATCAAATTGGGAAGAAAAAGTACTCTGGCCGACTACTTATAAGTGCTTCGGCAACTGTGGGTGCTTTACTACTGGTTGCCCTAATGTGTTTCTGGGGTTGCTTTCTGTATAAAAAGTTCGGCAAAAATGACAGTAAAGGTTTAGTGCTGAATGGCTGTGGAGGTGCTCGTGCTTCGGGTGTAATGTTTCACGGAGACTTGCCATACATGTCTAAAGATATTATTAAGAAATTTGAGACGTTGAATGAAGAACACATAATAGGATGCGGGGGCTTTGGAACCGTGTACAAGCTTGCAATGGATGATGGCAATGTTTTTGCCTTGAAAAGAATTATAAAATTGAACGAGGGCTTTGATCGTTTTTTTGAGAGAGAGCTTGAGATCCTTGGAAGCATAAAGCACAGGTTTCTTGTGAATTTGCGAGGATATTGCAATTCTCCCACATCAAAGCTGTTAATTTATGATTTCCTTCCTGGAGGCAGCCTTGACGAGGCACTACACGGCCTCCGTACTGAAGGATCTGAGCAACTAGACTGGGATGCACGCTTAAATATTATCATGGGAGCTGCAAAGGGACTTGCATATTTGCATCATGATTGCTCACCGCGAATCATTCACCGAGACATAAAATCAAGTAACATTCTACTTGATGCTAATTTGGAGGCTCGAGTTTCTGACTTTGGACTTGCGAAACTCTTAGAGGATGAAGAATCACATATCACGACTATTGTTGCAGGAACATTTGGTTATCTGGCTCCTGAGTATATGCAAAGTGGTAGAGCTACTGAAAAGACTGATGTATACAGTTTTGGGGTATTGATACTTGAAGTTTTGAGTGGCAAACGTCCCACAGATGCCTCATTCATTGAGAAGGGGCTAAACATTGTTGGTTGGTTAAACTTTCTAGTCACAGAGAATCGACAACGAGAAATAGTCGACTTACAGTGTGAGGGCATGCAAGCAGAGAGCTTGGATGCATTGCTTTCAGTTGCCATCCGATGTGTTTCGTCAAGTCCAGAGGAACGACCAACCATGCACAGAGTGGTCCAGATTCTGGAATCTGAGATTATGACTCCATGCCCAAGTGATTTCTATGATACAGATTAA 1800 41.5 MGFYTVKWQWLLILHIVPLCLIMSRSSGITSDGEALLSFRASILDSDGVLLQWKPEEPHPCKWKGITCDPKTKRVIYLSLPYHKLSGSLSPELGKLDHLKILALHDNNFYGTIPSELGNCSQLQGMFLQGNYFSGFIPNELGNLWALKNLDISSNSLGGNIPISLGKLSNLISLNVSANFLVGTIPNVGMLLNFSESSFLGNRGLCGKQINVMCKDDKKEPETNESPFSVQNQIGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDSKGLVLNGCGGARASGVMFHGDLPYMSKDIIKKFETLNEEHIIGCGGFGTVYKLAMDDGNVFALKRIIKLNEGFDRFFERELEILGSIKHRFLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHGLRTEGSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDANLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLILEVLSGKRPTDASFIEKGLNIVGWLNFLVTENRQREIVDLQCEGMQAESLDALLSVAIRCVSSSPEERPTMHRVVQILESEIMTPCPSDFYDTD 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7071782 7089298 + MELO3C010548.2.1 Cme07g00770 332786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00770 599 Gene3D Ribonuclease Inhibitor 29 216 IPR032675 -
Cme07g00770 599 Gene3D Phosphorylase Kinase; domain 1 289 387 - -
Cme07g00770 599 ProSitePatterns Protein kinases ATP-binding region signature. 318 344 IPR017441 GO:0005524
Cme07g00770 599 PANTHER RECEPTOR-LIKE PROTEIN 55 4 597 - -
Cme07g00770 599 SMART serkin_6 312 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00770 599 Gene3D Transferase(Phosphotransferase) domain 1 388 590 - -
Cme07g00770 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Cme07g00770 599 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 4 597 IPR031071 GO:0004672|GO:0005524|GO:0030244
Cme07g00770 599 ProSiteProfiles Protein kinase domain profile. 312 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00770 599 SUPERFAMILY Protein kinase-like (PK-like) 298 583 IPR011009 -
Cme07g00770 599 SUPERFAMILY L domain-like 29 199 - -
Cme07g00770 599 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Cme07g00770 599 Pfam Protein kinase domain 314 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01906 Cme-Chr2:25503751 Cme07g00770 Cme-Chr7:7071782 8.43E-154 dispersed
Cme07g00433 Cme-Chr7:2860654 Cme07g00770 Cme-Chr7:7071782 1.52E-100 dispersed
Cme07g00770 Cme-Chr7:7071782 Cme07g01514 Cme-Chr7:20996417 0 dispersed
Cme07g00770 Cme-Chr7:7071782 Cme12g01746 Cme-Chr12:24175729 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65008 PF00069 Pkinase 6.50E-45 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00770 - - csv:101211605 1207.59