Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00805 ATGGCGGCAGCGGTCGGAGGAGTTACTGCTAACGGCGCCGGTTTTATGATCGGCGGTGGAGATGTGTCGAAGGCGCATGCGGCTATGGCTTTGGTGCAATTAATTAATGGAGGTTACCATGTTATAACCAAAGTTGCCCTCAATGTTGGGATGAACCAGCTCGTCTTTTGTTTGTTCCGTGACTTGTTGGCTCTCGCGATTCTTGCCCCTGTCGCTTATGTTCGGGAGAAGCGGATTCGTTTGCCCATGACTCGGGACCTTCTCATATCCTTCTTTGTTCTTGGTTTAACTGGGATTTTTGGTAACCAGCTTCTCTTTCTTGTTGGACTTGGCTACACTAACCCAACTTATGCTGCTGCCATACAGCCTGCCATTCCAGTTTTTACATTCCTTTTTGCAGTTATGATGGGCACAGAGTCTGTTAACTTACTCAAACTGGAAGGACAGGCAAAGGTTGGAGGTACACTTGTTTGTGTCTCTGGTGCGATATTGATGGTTTTATTCCGGGGTCCAGCTTTGGTTGGAAACACTGAATCTGATTTCATGTCACATAATGAAATAAGTGCAAGGGGCCAGCCAGAGCCTGCTGGATGGTTAATGTCTAACTTTCTGGAGTATGGATTGGACCATTTTCATGTTGGGGTTTTATGCTTGATAGGAAACTGTATGTGCATGGCTGCTTTCTTGGCTATCCAGGCACGGGTTTTAAAGAAGTATCCCGCTAACTTGTCGGTCACAGCATATTCTTATTTATTTGGTGCTATGTTGATGGTGATCACATCTTTCTTTATGACCAATGAATCAACAGACTGGAATTTGACACGATCAGAGTTTTTCGCTGTCCTTTATGGTGGAATTTTTGCGTCGGCTATCAATTATGGACTCTTGACATGGTGCAATAAAATATTGGGACCTGCATTGGTCGCTCTGTACAATCCACTTCAACCTGCAGCATCTGCTCTGCTATCAAGAGTTTTCATAGGAAGCCCTATTTATCTTGGAAGTGTTTTGGGGGGATCTCTCATAATTGCTGGTCTTTATTTGGTTACTTGGGCGTCGCATAGGGAACGACAAACGACTACAGTTTTGCTACCGCATTCAACCAGGTCCTCCGAGCCACTTATTCACAAAGATGCATTGACTAACAAGTTTGCCTATCAAATAGGACACATTTTCTCAGGGTCTGCTTCATCGCCCAAATCTGTAGATTAA 1212 44.64 MAAAVGGVTANGAGFMIGGGDVSKAHAAMALVQLINGGYHVITKVALNVGMNQLVFCLFRDLLALAILAPVAYVREKRIRLPMTRDLLISFFVLGLTGIFGNQLLFLVGLGYTNPTYAAAIQPAIPVFTFLFAVMMGTESVNLLKLEGQAKVGGTLVCVSGAILMVLFRGPALVGNTESDFMSHNEISARGQPEPAGWLMSNFLEYGLDHFHVGVLCLIGNCMCMAAFLAIQARVLKKYPANLSVTAYSYLFGAMLMVITSFFMTNESTDWNLTRSEFFAVLYGGIFASAINYGLLTWCNKILGPALVALYNPLQPAASALLSRVFIGSPIYLGSVLGGSLIIAGLYLVTWASHRERQTTTVLLPHSTRSSEPLIHKDALTNKFAYQIGHIFSGSASSPKSVD 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7598776 7602931 + MELO3C010517.2.1 Cme07g00805 332821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00805 403 Pfam EamA-like transporter family 213 350 IPR000620 GO:0016020|GO:0016021
Cme07g00805 403 Pfam EamA-like transporter family 29 148 IPR000620 GO:0016020|GO:0016021
Cme07g00805 403 PANTHER WAT1-RELATED PROTEIN 23 395 IPR030184 GO:0016021|GO:0022857
Cme07g00805 403 PANTHER WAT1-RELATED PROTEIN 23 395 - -
Cme07g00805 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 356 - -
Cme07g00805 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 60 168 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00805 Cme-Chr7:7598776 Cme04g00502 Cme-Chr4:4070978 8.79E-69 dispersed
Cme07g00805 Cme-Chr7:7598776 Cme03g01914 Cme-Chr3:27258768 8.15E-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00805 - - csv:101222886 775.007