Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00834 ATGTCGGAAACGAAGTTCTTCGACGCTGCGGCCGCGACGGAGTTGGTGAAGGAACTTAGAGCTATTTTTATCTCCGGCAACACTCGGAGCTATGAGTGGAGAGTATCACAGCTTGAGAGCCTCTTGAAGCTCTGCGTTGACCATGAGGAAGATATTTGCGATGCGCTTCGCTCTGACCTCTCCAAGCCTGCCTTGGAGTCCATTATTCACGAGTTTCAATTTCATCTGCCAAATATAGTTATTGGAGCAATAGCAGCTGGTAATGCCGTGGTTCTAAAGCCATCAGAAATTTCTCCAGCAACATCATCTTTAATTGTAAAACTTTTTGAGAAGTATTTGGATACGTCTGCTGTAAAAGTTGTCAAGGGTGCTATTCCCGAAACTAATGCTTTGCTGGAGCAAAAGTGGGACAAGATATTTTACACAGGCAACGGTAGAGTGGGGCGTATAGTTATGGCAGCTGCTGCCAAGCACCTTACTCCAGTTATTTTAGAGCTCGGAGGAAAAACTCCAGTAGTAGTTGATTCAAAAATCAATTTACAAGTTGCCTGTAGACGGATTATATCTGGGAAGTGGGGTGGTAACAATGGACAAGCTTGCGTTGCTCCTGATTACATCATAACTACGAAAGAATTTGCTCCAAAATTGGTGGAGTCATTGAAACAAGAATTGGAGAGATTTTATGGAAAGAATCCATTGGAATCTAAAGATATATCTCGCATTGTGAATGCTAACCACTTTAATCGCGTGACCAAACTTTTAGATGATGATGAAGTTTCTAGCAAGATCGTTCATGGAGGCCAAAAGGACAAAACCAAATTACAGATTGCTCCCACCATCTTATTGGATGTCCCTCGAGATTCTTTGATCATGACGGAAGAGATTTTTGGTCCCTTGCTTCCCATTATCACGGTAGACAAGTTGGAGGATAGCTTCGAAATAGTGAATTCAGGCACAAAGCCGCTAGCAGCATATTTATTTTCCAACAACAAAAAGCTCAAGGAACAGTTTGTGGCTTGTATCTCTGCAGGAGGTGTGGTTATCAACGACACCACCATACATCTAGCAGTTAGCACACTACCATTTGGAGGAGTTGGGGAGAGTGGAATGGGAGCTTACCATGGGAAGTTTTCATTTGATGCATTTAGCCATAAGAAGGCTGTTCTTTATCGAAGTTTCGTGGGTGACGTGCCAATGCGATACCCGCCTTACACCGATGGAAAGCTAAGATTTCTTAAAGCTCTTCTTGGAGGTGGCATCTTGGAACTCATTCGTGCTCTTCTTGGTTGGTCGTAA 1296 43.29 MSETKFFDAAAATELVKELRAIFISGNTRSYEWRVSQLESLLKLCVDHEEDICDALRSDLSKPALESIIHEFQFHLPNIVIGAIAAGNAVVLKPSEISPATSSLIVKLFEKYLDTSAVKVVKGAIPETNALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVILELGGKTPVVVDSKINLQVACRRIISGKWGGNNGQACVAPDYIITTKEFAPKLVESLKQELERFYGKNPLESKDISRIVNANHFNRVTKLLDDDEVSSKIVHGGQKDKTKLQIAPTILLDVPRDSLIMTEEIFGPLLPIITVDKLEDSFEIVNSGTKPLAAYLFSNNKKLKEQFVACISAGGVVINDTTIHLAVSTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSFVGDVPMRYPPYTDGKLRFLKALLGGGILELIRALLGWS 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8049201 8056451 - MELO3C010494.2.1 Cme07g00834 332850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00834 431 PIRSF ALDH 72 423 IPR012394 GO:0006081
Cme07g00834 431 PIRSF ALDH 1 79 IPR012394 GO:0006081
Cme07g00834 431 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 168 368 IPR016163 GO:0016620
Cme07g00834 431 PANTHER ALDEHYDE DEHYDROGENASE 4 72 IPR012394 GO:0006081
Cme07g00834 431 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 20 74 IPR016162 GO:0016491
Cme07g00834 431 PANTHER ALDEHYDE DEHYDROGENASE 79 431 - -
Cme07g00834 431 PANTHER ALDEHYDE DEHYDROGENASE 4 72 - -
Cme07g00834 431 Pfam Aldehyde dehydrogenase family 80 388 IPR015590 GO:0016491
Cme07g00834 431 SUPERFAMILY ALDH-like 14 404 IPR016161 GO:0016491
Cme07g00834 431 PANTHER ALDEHYDE DEHYDROGENASE 79 431 IPR012394 GO:0006081
Cme07g00834 431 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 80 386 IPR016162 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00834 Cme-Chr7:8049201 Cme07g01699 Cme-Chr7:22544320 1.78E-136 dispersed
Cme07g00834 Cme-Chr7:8049201 Cme07g00835 Cme-Chr7:8057448 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00834 K00128 - csv:101219569 766.148