Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00859 ATGGGAGCTGAAACAGGGCTTGCAATGTTTTGTGGAATCATTCAAAAAATAAAACCCTACTTGGCTATGGTTTCCTTGCAATTTGGATATGCAGGGATGTATATTATCACCATGCTTTGTCTCAAGAAAGGCATGAACCATTACGTTCTTGCCGTGTATCGACACGTCGTTGCCACCATTGTCATCGTCCCCTTTGCTATCGTCCTTGAAAGAAAAATAAGGCCGAAGATGACATTAGCAATCTTTGCACGAGTATTGCTCCTCGGATTTCTCGAGCCTGTGTTGGATCAAAATCTATACTATGTGGGTTTGAAACTTACCTCAGCAACATTTACCTCTGTCACCATCAATATTCTACCTGCAGTAACTTTCATAATGGCTCTCATTTTCAGGCTAGAAAGTGTGAACTTCAAGAAGATCCGTAGCATTGCAAAGGTGGTAGGAACATTGGTAACAATCGGCGGAGCAATGGTGATGACTCTATACAAAGGACCAATCGTGGACATATTTCACGGTCATGGACGCCATGCCGCCCACCACAGCAGCAGCAGTGAGTCTGCCGACCAGCACTGGGTCCTCGGCACCCTCATGCTCCTCGGCAGCATCGTGGGCTGGTCGGGCTTCTTCATCTTACAATCGTTCACGCTGAGAAAATACCCAGCGGAGCTGTCGTTAACGGCCCTGATATGCGTAGCCGGTGCGGTGGAGGGCTCCATTGTGACGCTTATTATGGAGCGTGACTTTAGCGTGTGGGTCATCGGCTGGGACTCTCGCCTTCTTGCCGCTGTTTATACTGGTGTGATATGCTCTGGACTTGCATATTACATACAAGGTGTGGTAATTCGGGAACGTGGCCCAGTTTTTGTTACCTCTTTTACCCCTCTCTGCATGATTATTACCGCCATTCTTGGCTCCATTGTTTTGGCTGAGCAAATTCACCTTGGAAGCATAATAGGAGCGATTTTCATAGTGATGGGGCTATACTTAGTGGTGTGGGGAAAAGCCAAAGACCACCTAAACAAATTGACGAATCAGAAAAGCAGCGCCGCCACCGAGTTACCGATCACCACCGAGCCGGAAACTACCGCCGCCGAGCGTTGTTCATCAAAAGCTCCACCGGCTTGA 1125 48.0 MGAETGLAMFCGIIQKIKPYLAMVSLQFGYAGMYIITMLCLKKGMNHYVLAVYRHVVATIVIVPFAIVLERKIRPKMTLAIFARVLLLGFLEPVLDQNLYYVGLKLTSATFTSVTINILPAVTFIMALIFRLESVNFKKIRSIAKVVGTLVTIGGAMVMTLYKGPIVDIFHGHGRHAAHHSSSSESADQHWVLGTLMLLGSIVGWSGFFILQSFTLRKYPAELSLTALICVAGAVEGSIVTLIMERDFSVWVIGWDSRLLAAVYTGVICSGLAYYIQGVVIRERGPVFVTSFTPLCMIITAILGSIVLAEQIHLGSIIGAIFIVMGLYLVVWGKAKDHLNKLTNQKSSAATELPITTEPETTAAERCSSKAPPA 374
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 8550197 8553762 - MELO3C010471.2.1 Cme07g00859 332875
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00859 374 MobiDBLite consensus disorder prediction 350 364 - -
Cme07g00859 374 PANTHER WAT1-RELATED PROTEIN 13 356 IPR030184 GO:0016021|GO:0022857
Cme07g00859 374 MobiDBLite consensus disorder prediction 350 374 - -
Cme07g00859 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Cme07g00859 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 335 - -
Cme07g00859 374 Pfam EamA-like transporter family 31 147 IPR000620 GO:0016020|GO:0016021
Cme07g00859 374 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Cme07g00859 374 PANTHER WAT1-RELATED PROTEIN 13 356 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cme03g01505 Cme07g00859 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00574 Cme-Chr3:8965872 Cme07g00859 Cme-Chr7:8550197 4.98E-138 dispersed
Cme05g00553 Cme-Chr5:5374809 Cme07g00859 Cme-Chr7:8550197 6.26E-86 dispersed
Cme07g00859 Cme-Chr7:8550197 Cme10g00733 Cme-Chr10:4653085 4.43E-122 dispersed
Cme07g00859 Cme-Chr7:8550197 Cme08g02377 Cme-Chr8:30644568 1.01E-116 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00859 - - csv:101216002 676.781