Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01006 ATGAGCTGGACTGCTGATGGATATGTTGCTGTAGTTACTCTGTATAATTTCCAACAATATCGTCATATTCAAACACCGGGATGGTCTCTTCAATGGAAATGGGCAAAGAAAGAGGTCATATGGAACATGATGGGAGGCCAAGCAACTGAGCAAGGTGATTGTTCTAGATTTAAGGGGAACATCCCCCATTGCTGCAAGAAGGATCCAACGGTTGTTGATCTATTGCCCGGAACTCCTTATAACCAACAGATTGCAAATTGCTGTAAAGGTGGAGTTCTTAACTCCTGGGTGCAAGATCCAGCTACTGCAGTAAGCTCATTTCAGCTCACCGTTGGTTCAGCCGGAACCTCAAATAAAACCGTCCGACTACCAAAGAACTTCACTTTAAAAGCACCTGGACCTGGTTATACCTGTGGACCAGCCAAGATTGTTAAACCGAGCAAATTCAAATCCCCAGACAAACGGAGAGTTACACAGGCCTTGATGACATGGAATGTTACATGCACATATTCACAATTTCTGGCCCAAAAAACTCCTACTTGCTGTGTTTCGCTGTCATCATTTTACAACAACACAATTGTTTCTTGCCCGAAATGCTCCTGTGGCTGCCAAAGCAACTTGAACGCACCCCAAAATTGTGTGGAGCCAAATTCTCCATATTTAGCTTCTGTTGTTAACAGTGCTAGTTCTAGCAAGAACAATTTGACACCTTTGGTTCAGTGTACTGGCCACATGTGCCCGATCCGTGTTCACTGGCACGTGAAGATTAACTATAAGGAGTATTGGCGTGTGAAGATCACAATTACAAACTTCAATTACATGATGAACTATACAAATTGGAACTTAGTTGTCCAACATCCCAACTTCGACAATCTGACACAGATTTTCAGCTTCAACTACCAGTCAATCAATCCATATGGAACAATAAATGATACTGCAATCCTGTGGGGAGTCAAGTTCTACAACGATTTGCTCATGCAAGCAGGTCCTCTTGGGAATGTACAGACAGAGCTTCTTTTCCGGAAGGATCAATCGGATTTCACATTTGATAAAGGCTGGGCTTTCCCTCGGAGGATCTATTTTAATGGGGACAATTGTGTTATGCCACCTCCAGAAGCCTATCCCTACTTACCGAACAAGGGTTCTAAGCGAGGTGTCTCAGTGTTTACTATGCGTTTGCTGATTTCCTTGGCTCTCTTGTCCTTTCACCATTCGTTTGCATAA 1224 43.3 MSWTADGYVAVVTLYNFQQYRHIQTPGWSLQWKWAKKEVIWNMMGGQATEQGDCSRFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPATAVSSFQLTVGSAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVKPSKFKSPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVSCPKCSCGCQSNLNAPQNCVEPNSPYLASVVNSASSSKNNLTPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYMMNYTNWNLVVQHPNFDNLTQIFSFNYQSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSDFTFDKGWAFPRRIYFNGDNCVMPPPEAYPYLPNKGSKRGVSVFTMRLLISLALLSFHHSFA 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11262888 11265268 + MELO3C026307.2.1 Cme07g01006 333022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01006 407 PANTHER PROTEIN COBRA 1 405 IPR006918 GO:0010215|GO:0031225
Cme07g01006 407 Pfam COBRA-like protein 8 171 IPR006918 GO:0010215|GO:0031225
Cme07g01006 407 PIRSF COBRA 1 407 IPR006918 GO:0010215|GO:0031225
Cme07g01006 407 PANTHER COBRA-LIKE PROTEIN 1 405 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01813 Cme-Chr2:24898747 Cme07g01006 Cme-Chr7:11262888 0 dispersed
Cme06g01212 Cme-Chr6:9738731 Cme07g01006 Cme-Chr7:11262888 2.19E-151 dispersed
Cme07g01006 Cme-Chr7:11262888 Cme07g01007 Cme-Chr7:11264550 0 tandem
Cme01g01287 Cme-Chr1:16218110 Cme07g01006 Cme-Chr7:11262888 1.71E-42 transposed
Cme12g01924 Cme-Chr12:25270241 Cme07g01006 Cme-Chr7:11262888 2.16E-178 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01006 - - csv:101207224 851.277