Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01007 ATGTCTTGGACACCCGATGGCTATGTGGCAGTAGTCACGTTGAACAACTTCCAAATGTACCGGCATATAATGAGCCCTGGGTGGACAATGGGGTGGACTTGGGCGAAAAAGGAAGTGATATGGTCGATGGTGGGGTCGCAGACAACGGAGCAAGGCGACTGCTCCAAGTTCAAAGGAAACATTCCTCACTGCTGCAAGAAAAACCCCACTGTTGTGGATTTGATGCCTGGTGTTCCTTACAACCAACAGTTTACAAACTGCTGCAAAGGTGGGGTTGTGGCTGCTTGGGGACAAGACCCTCAAGCTGCTATTTCAGCCTTTCAGCTTAGTGTTGGCCAAGCAGGTACTTCAAACAAGACTGTCAAGCTCCCCAAGAACTTCACTTTGCTCGGTCCCGGCCCCGGATACACTTGTGGCCGTGCAAAAGTTGTGCCTTCCACCACTTTCCTCACACCCGACCGTCGCCGCAAAACTCAAGCTTTGATGACTTGGAATGTGACTTGCACTTACTCTCAGTTTCTAGCAAGAAAGAATCCTAATTGTTGTGTTTCTTTCTCATCTTTCTACAATGATACGATTACATCTTGTCCATCTTGTGCCTGCGGTTGCCAAAACAAGAACAATTGTGTACAGAATGATTCTAAGATTCTTAAACTGGTTGGAATCAATACACCAAGGAAAGACAATGCCCCGTTGCTGCATTGCACACATCACATGTGCCCTGTTCGAGTTCACTGGCACGTAAAGCAAAATTACAAGGAATATTGGCGGGTGAAGATCACCATCACAAACTTCAACTACCGAATGAACTATTCACTTTGGTCTCTTGTTGTCCAGCACCCGAATCTGAACAATGTAACACAAGTTTTCAGCTTTGACTATAAACCCCTTGTTCCCTATGAATCGATTAATGATACAGGAATGTTTTATGGGATGAAGTTCTATAACGACCTTCTTATGGAAGCGGGGCCATTTGGGAATGTACAATCAGAAGTGTTGTTGCGAAAAGACCAGAATACGTTCACTTTCAAGCAGGGATGGGCATTTCCTCGAAAAGTTTACTTCAATGGTGACGAGTGCATGCTTCCGCCACCCGACACATACCCTTTCCTGCCAAACGCTGCCCGACAAAGGCCCATTGCCCTCTCATCTTCAATTACTTTGCTGCTGCTATTGCTTCTGCTAGCTATTTGCTGA 1197 46.12 MSWTPDGYVAVVTLNNFQMYRHIMSPGWTMGWTWAKKEVIWSMVGSQTTEQGDCSKFKGNIPHCCKKNPTVVDLMPGVPYNQQFTNCCKGGVVAAWGQDPQAAISAFQLSVGQAGTSNKTVKLPKNFTLLGPGPGYTCGRAKVVPSTTFLTPDRRRKTQALMTWNVTCTYSQFLARKNPNCCVSFSSFYNDTITSCPSCACGCQNKNNCVQNDSKILKLVGINTPRKDNAPLLHCTHHMCPVRVHWHVKQNYKEYWRVKITITNFNYRMNYSLWSLVVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDLLMEAGPFGNVQSEVLLRKDQNTFTFKQGWAFPRKVYFNGDECMLPPPDTYPFLPNAARQRPIALSSSITLLLLLLLLAIC 398
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 11264550 11267040 - MELO3C026306.2.1 Cme07g01007 333023
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01007 398 PIRSF COBRA 1 398 IPR006918 GO:0010215|GO:0031225
Cme07g01007 398 PANTHER PROTEIN COBRA 1 394 IPR006918 GO:0010215|GO:0031225
Cme07g01007 398 Pfam COBRA-like protein 8 171 IPR006918 GO:0010215|GO:0031225
Cme07g01007 398 PANTHER COBRA-LIKE PROTEIN 1 394 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01812 Cme-Chr2:24896065 Cme07g01007 Cme-Chr7:11264550 0 dispersed
Cme07g01007 Cme-Chr7:11264550 Cme12g01924 Cme-Chr12:25270241 0 dispersed
Cme07g01006 Cme-Chr7:11262888 Cme07g01007 Cme-Chr7:11264550 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01007 - - csv:101217724 822.772