Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01023 ATGGGAAGAGGGAGAGTTCAGCTGAAGAGAATAGAGAACAAAATCAGCCGCCAAGTCACTTTCTCAAAGCGTAGAGCTGGTTTACTCAAAAAGGCTCATGAGATCTCTGTTCTTTGTGAAGCTGATGTTGCTTTGATTGTTTTCTCCACCAAAGGAAAACTCTTCGAGTACTCCTCTGATTCCAGCATGGAGAAGATCTTAGAAAAATATGAGAGATATTCTTATGCAGAGAGACCGTTCGCCCCAAGTGGAGATTCTGAATTACAGACAAGTTGGTGTCAGGAGTATCCAAAACTTACAGCCAGATTGGAAATTGTACAGAAGAACTTAAGGCATTATTTGGGTGAAGATCTCGACCCTCTGAATTTGAGAGAACTTCAAAGCTTAGAGCAACAACTTGATACATCACTCAAGCGCATAAGATCTAGAAAGAACCAACTAATGCAAGAATCTATTTCAATATTGCACAAAAAGGAAAAGGCATTGCAAGAGGAGAACAGGCAGCTAGCAAATAAGGTAAAGGAAAATGAGAAGGCTTTGGTTGAACGTGGACAGTGCGATGTTCCAAACTTGGTTCATAATAAACAGCTCATTTTTGGAATGACACCACCAATTCCTTCTTTATCTTTCGGAGCGAACTTGAATGGGAGAGGATCAAGAGGATCAGATGAAGATGAAACAAGGCCAACAAGCATCGACAACATCCAAATACCAGCGTGGATGCTTCGCCATGTGACTGAAAATTCTAATAACTAA 756 40.74 MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSDSSMEKILEKYERYSYAERPFAPSGDSELQTSWCQEYPKLTARLEIVQKNLRHYLGEDLDPLNLRELQSLEQQLDTSLKRIRSRKNQLMQESISILHKKEKALQEENRQLANKVKENEKALVERGQCDVPNLVHNKQLIFGMTPPIPSLSFGANLNGRGSRGSDEDETRPTSIDNIQIPAWMLRHVTENSNN 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11749033 11755493 + MELO3C026299.2.1 Cme07g01023 333039

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01023 251 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Cme07g01023 251 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 231 - -
Cme07g01023 251 CDD MADS_MEF2_like 2 76 IPR033896 GO:0000977|GO:0045944
Cme07g01023 251 Gene3D - 13 81 IPR036879 GO:0003677|GO:0046983
Cme07g01023 251 MobiDBLite consensus disorder prediction 210 233 - -
Cme07g01023 251 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Cme07g01023 251 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Cme07g01023 251 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Cme07g01023 251 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-LIKE PROTEIN 1 231 - -
Cme07g01023 251 Coils Coil 126 150 - -
Cme07g01023 251 Coils Coil 152 182 - -
Cme07g01023 251 Pfam K-box region 89 173 IPR002487 GO:0003700|GO:0005634|GO:0006355
Cme07g01023 251 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Cme07g01023 251 ProSiteProfiles K-box domain profile. 89 179 IPR002487 GO:0003700|GO:0005634|GO:0006355
Cme07g01023 251 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Cme07g01023 251 SUPERFAMILY SRF-like 2 80 IPR036879 GO:0003677|GO:0046983
Cme07g01023 251 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01023 K09264 K09264; MADS-box transcription factor, plant - csv:101218674 485.337
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01023 Cme-Chr7:11749033 Cme12g01920 Cme-Chr12:25234067 3.24E-87 dispersed
Cme08g00026 Cme-Chr8:211301 Cme07g01023 Cme-Chr7:11749033 3.88E-38 dispersed
Cme07g01021 Cme-Chr7:11591766 Cme07g01023 Cme-Chr7:11749033 3.39E-57 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi14g994 . Blo11g00324 . . . . . . Cmo14g01180 Cmo01g00455 Cma01g00424 Cma14g01148 . Car14g01026 . Cpe03g00969 . . . . . . . . . . . . . . . . . . . . . . Cme07g01023 Blo17g00396 . . . . . . . . . . . . . . Cpe02g01396 . Bhi01g02245 . . . Hepe02g0915 . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cme08g00190 CCT 15 237 MADS-box Gene Family AT3G58780 64.4 8.6e-74 273.9
Cme12g01251 CCT 19 246 MADS-box Gene Family AT3G58780 61.4 3.0e-71 265.4
Cme12g01920 . 1 260 MADS-box Gene Family AT1G26310 53.0 1.6e-64 243.0
Cme07g01023 . 1 187 MADS-box Gene Family AT1G26310 64.6 3.2e-60 228.8
Cme03g01462 . 1 166 MADS-box Gene Family AT1G26310 64.0 1.1e-55 213.8
Cme11g02324 . 1 208 MADS-box Gene Family AT1G26310 50.7 1.4e-44 176.8
Cme07g01021 . 1 173 MADS-box Gene Family AT1G26310 53.4 4.3e-41 165.2
Cme11g02532 . 1 155 MADS-box Gene Family AT1G26310 59.4 5.6e-41 164.9
Cme03g01461 . 1 142 MADS-box Gene Family AT1G26310 60.0 1.4e-39 160.2
Cme12g01921 . 1 174 MADS-box Gene Family AT1G26310 53.4 1.4e-39 160.2
Cme08g00190 CCT 17 192 MADS-box Gene Family AT4G09960 72.7 3.9e-65 245.0
Cme12g01251 CCT 26 211 MADS-box Gene Family AT4G09960 69.4 1.2e-63 240.0
Cme11g02532 . 1 245 MADS-box Gene Family AT3G61120 53.6 2.1e-61 232.6
Cme11g02324 . 1 170 MADS-box Gene Family AT3G61120 55.8 2.4e-41 166.0
Cme06g00946 . 1 166 MADS-box Gene Family AT3G61120 51.2 3.2e-41 165.6
Cme06g00227 . 1 219 MADS-box Gene Family AT4G11880 55.0 7.5e-50 194.1
Cme11g02531 . 1 214 MADS-box Gene Family AT4G11880 50.7 2.3e-46 182.6
Cme09g01706 . 1 143 MADS-box Gene Family AT4G11880 68.1 1.6e-44 176.4
Cme06g00949 CCT,ECH 1 190 MADS-box Gene Family AT4G11880 53.9 1.5e-42 169.9
Cme09g01472 CCT,ECH 1 156 MADS-box Gene Family AT4G11880 61.1 2.0e-39 159.5
Cme07g02236 . 1 160 MADS-box Gene Family AT2G22630 66.3 6.7e-54 207.6
Cme08g00712 . 1 160 MADS-box Gene Family AT2G22630 66.9 1.3e-52 203.4
Cme08g01507 . 18 195 MADS-box Gene Family AT3G57390 51.1 1.5e-40 163.3
Cme06g00227 . 1 219 MADS-box Gene Family AT4G22950 54.3 2.1e-52 202.6
Cme11g02531 . 1 214 MADS-box Gene Family AT4G22950 54.8 3.9e-51 198.4
Cme09g01706 . 1 143 MADS-box Gene Family AT4G22950 67.8 8.5e-46 180.6
Cme06g00949 CCT,ECH 1 190 MADS-box Gene Family AT4G22950 52.6 1.1e-42 170.2
Cme09g01472 CCT,ECH 1 153 MADS-box Gene Family AT4G22950 62.1 7.4e-42 167.5
Cme07g01021 . 1 246 MADS-box Gene Family AT5G15800 71.5 2.0e-97 352.4
Cme11g02324 . 1 241 MADS-box Gene Family AT5G15800 59.8 1.5e-73 273.1
Cme12g01921 . 1 227 MADS-box Gene Family AT5G15800 57.3 1.7e-61 233.0
Cme03g01461 . 1 189 MADS-box Gene Family AT5G15800 59.0 8.0e-51 197.6
Cme07g01023 . 1 175 MADS-box Gene Family AT5G15800 55.4 8.1e-43 171.0
Cme06g00946 . 1 168 MADS-box Gene Family AT5G15800 55.0 1.9e-39 159.8
Cme11g02531 . 1 162 MADS-box Gene Family AT2G45660 68.5 2.0e-52 202.2
Cme06g00227 . 1 162 MADS-box Gene Family AT2G45660 66.7 9.8e-52 199.9
Cme09g01706 . 1 143 MADS-box Gene Family AT2G45660 67.8 2.1e-46 182.2
Cme09g01472 CCT,ECH 1 157 MADS-box Gene Family AT2G45660 65.0 3.6e-46 181.4
Cme06g00949 CCT,ECH 1 160 MADS-box Gene Family AT2G45660 58.8 2.7e-41 165.2
Cme07g02236 . 1 155 MADS-box Gene Family AT4G37940 67.1 4.9e-54 208.0
Cme08g00712 . 1 155 MADS-box Gene Family AT4G37940 67.7 2.4e-53 205.7
Cme08g00728 . 1 228 MADS-box Gene Family AT2G22540 64.0 6.4e-71 264.2
Cme03g01799 . 1 227 MADS-box Gene Family AT2G22540 53.4 2.9e-55 212.2
Cme08g00728 . 1 225 MADS-box Gene Family AT4G24540 58.0 1.0e-59 226.9
Cme03g01799 . 1 227 MADS-box Gene Family AT4G24540 55.0 4.8e-57 218.0
Cme07g01021 . 1 171 MADS-box Gene Family AT2G03710 66.9 2.4e-57 218.8
Cme11g02324 . 1 176 MADS-box Gene Family AT2G03710 63.8 1.5e-54 209.5
Cme12g01921 . 1 172 MADS-box Gene Family AT2G03710 62.4 8.9e-52 200.3
Cme03g01461 . 1 171 MADS-box Gene Family AT2G03710 58.1 7.8e-48 187.2
Cme11g02532 . 1 169 MADS-box Gene Family AT2G03710 54.1 1.7e-42 169.5
Cme07g01023 . 1 173 MADS-box Gene Family AT2G03710 52.3 5.0e-39 157.9
Cme07g01021 . 1 170 MADS-box Gene Family AT3G02310 86.0 4.2e-76 281.2
Cme11g02324 . 1 172 MADS-box Gene Family AT3G02310 77.9 1.2e-67 253.1
Cme12g01921 . 1 171 MADS-box Gene Family AT3G02310 66.1 6.8e-58 220.7
Cme11g02532 . 1 168 MADS-box Gene Family AT3G02310 62.6 7.5e-49 190.7
Cme03g01461 . 1 170 MADS-box Gene Family AT3G02310 62.0 1.4e-47 186.4
Cme07g01023 . 1 181 MADS-box Gene Family AT3G02310 54.1 8.9e-42 167.2
Cme06g00946 . 1 173 MADS-box Gene Family AT3G02310 54.0 3.7e-40 161.8
Cme09g01472 CCT,ECH 1 145 MADS-box Gene Family AT5G62165 67.6 6.4e-48 187.2
Cme06g00949 CCT,ECH 1 147 MADS-box Gene Family AT5G62165 61.9 7.3e-44 173.7
Cme09g01706 . 1 150 MADS-box Gene Family AT5G62165 60.7 3.1e-42 168.3
Cme11g02531 . 1 154 MADS-box Gene Family AT5G62165 57.1 4.0e-42 167.9
Cme06g00227 . 1 146 MADS-box Gene Family AT5G62165 58.9 8.9e-42 166.8
Cme07g02236 . 1 142 MADS-box Gene Family AT2G14210 76.9 2.6e-56 215.7
Cme08g00712 . 1 142 MADS-box Gene Family AT2G14210 68.5 1.4e-46 183.3
Cme08g00190 CCT 15 237 MADS-box Gene Family AT2G42830 62.7 4.0e-68 255.0
Cme12g01251 CCT 21 248 MADS-box Gene Family AT2G42830 59.6 2.0e-67 252.7
Cme11g02532 . 1 169 MADS-box Gene Family AT2G42830 50.9 9.3e-41 164.1
Cme11g02532 . 1 249 MADS-box Gene Family AT2G45650 62.8 1.3e-82 303.1
Cme06g00946 . 1 168 MADS-box Gene Family AT2G45650 57.1 1.7e-45 179.9
Cme12g01251 CCT 26 199 MADS-box Gene Family AT2G45650 50.6 8.9e-39 157.5
Cme07g01023 . 1 169 MADS-box Gene Family AT2G45650 50.9 7.5e-38 154.5
Cme08g00155 . 49 165 MADS-box Gene Family AT1G29960 56.4 1.3e-38 156.0
Cme12g01920 . 76 205 MADS-box Gene Family AT1G69120 64.6 3.4e-38 155.2
Cme09g01472 CCT,ECH 1 144 MADS-box Gene Family AT5G51870 57.3 4.0e-39 158.3
Cme06g00949 CCT,ECH 1 146 MADS-box Gene Family AT5G51870 54.8 5.3e-39 157.9
Cme09g01472 CCT,ECH 1 153 MADS-box Gene Family AT5G51860 56.4 6.4e-40 161.0
Cme12g01920 . 1 195 MADS-box Gene Family AT3G30260 57.4 1.6e-48 189.9
Cme03g01462 . 1 198 MADS-box Gene Family AT3G30260 51.5 1.6e-40 163.3
Cme12g01920 . 76 256 MADS-box Gene Family AT5G60910 54.7 1.9e-43 172.6
Cme11g02324 . 1 242 MADS-box Gene Family AT1G24260 72.5 1.7e-87 319.3
Cme07g01021 . 1 245 MADS-box Gene Family AT1G24260 59.3 1.6e-69 259.6
Cme03g01461 . 1 142 MADS-box Gene Family AT1G24260 65.8 8.6e-44 174.1
Cme07g01023 . 1 158 MADS-box Gene Family AT1G24260 55.6 3.4e-40 162.2
Cme06g00946 . 1 157 MADS-box Gene Family AT1G24260 54.3 1.2e-37 153.7
Cme04g00496 . 27 270 MADS-box Gene Family AT3G54340 58.2 5.2e-70 261.2
Cme07g00807 . 38 176 MADS-box Gene Family AT5G20240 71.2 3.8e-53 204.5
Cme07g00807 . 38 176 MADS-box Gene Family AT5G20240 71.2 3.8e-53 204.5
Cme04g00496 . 27 270 MADS-box Gene Family AT3G54340 58.2 5.2e-70 261.2
Cme08g00190 CCT 15 237 MADS-box Gene Family AT3G58780 64.4 8.6e-74 273.9
Cme12g01251 CCT 19 246 MADS-box Gene Family AT3G58780 61.4 3.0e-71 265.4
Cme07g01021 . 1 246 MADS-box Gene Family AT5G15800 71.5 2.0e-97 352.4
Cme11g02324 . 1 241 MADS-box Gene Family AT5G15800 59.8 1.5e-73 273.1
Cme12g01921 . 1 227 MADS-box Gene Family AT5G15800 57.3 1.7e-61 233.0
Cme03g01461 . 1 189 MADS-box Gene Family AT5G15800 59.0 8.0e-51 197.6
Cme07g01023 . 1 175 MADS-box Gene Family AT5G15800 55.4 8.1e-43 171.0
Cme06g00946 . 1 168 MADS-box Gene Family AT5G15800 55.0 1.9e-39 159.8
Cme07g01021 . 1 171 MADS-box Gene Family AT2G03710 66.9 2.4e-57 218.8
Cme11g02324 . 1 176 MADS-box Gene Family AT2G03710 63.8 1.5e-54 209.5
Cme12g01921 . 1 172 MADS-box Gene Family AT2G03710 62.4 8.9e-52 200.3
Cme03g01461 . 1 171 MADS-box Gene Family AT2G03710 58.1 7.8e-48 187.2
Cme11g02532 . 1 169 MADS-box Gene Family AT2G03710 54.1 1.7e-42 169.5
Cme07g01023 . 1 173 MADS-box Gene Family AT2G03710 52.3 5.0e-39 157.9
Cme07g01021 . 1 170 MADS-box Gene Family AT3G02310 86.0 4.2e-76 281.2
Cme11g02324 . 1 172 MADS-box Gene Family AT3G02310 77.9 1.2e-67 253.1
Cme12g01921 . 1 171 MADS-box Gene Family AT3G02310 66.1 6.8e-58 220.7
Cme11g02532 . 1 168 MADS-box Gene Family AT3G02310 62.6 7.5e-49 190.7
Cme03g01461 . 1 170 MADS-box Gene Family AT3G02310 62.0 1.4e-47 186.4
Cme07g01023 . 1 181 MADS-box Gene Family AT3G02310 54.1 8.9e-42 167.2
Cme06g00946 . 1 173 MADS-box Gene Family AT3G02310 54.0 3.7e-40 161.8
Cme08g00190 CCT 15 237 MADS-box Gene Family AT2G42830 62.7 4.0e-68 255.0
Cme12g01251 CCT 21 248 MADS-box Gene Family AT2G42830 59.6 2.0e-67 252.7
Cme11g02532 . 1 169 MADS-box Gene Family AT2G42830 50.9 9.3e-41 164.1
Cme11g02532 . 1 249 MADS-box Gene Family AT2G45650 62.8 1.3e-82 303.1
Cme06g00946 . 1 168 MADS-box Gene Family AT2G45650 57.1 1.7e-45 179.9
Cme12g01251 CCT 26 199 MADS-box Gene Family AT2G45650 50.6 8.9e-39 157.5
Cme07g01023 . 1 169 MADS-box Gene Family AT2G45650 50.9 7.5e-38 154.5
Cme12g01920 . 76 205 MADS-box Gene Family AT1G69120 64.6 3.4e-38 155.2
Cme12g01920 . 76 256 MADS-box Gene Family AT5G60910 54.7 1.9e-43 172.6
Cme11g02324 . 1 242 MADS-box Gene Family AT1G24260 72.5 1.7e-87 319.3
Cme07g01021 . 1 245 MADS-box Gene Family AT1G24260 59.3 1.6e-69 259.6
Cme03g01461 . 1 142 MADS-box Gene Family AT1G24260 65.8 8.6e-44 174.1
Cme07g01023 . 1 158 MADS-box Gene Family AT1G24260 55.6 3.4e-40 162.2
Cme06g00946 . 1 157 MADS-box Gene Family AT1G24260 54.3 1.2e-37 153.7
Cme12g01920 . 1 260 MADS-box Gene Family AT1G26310 53.0 1.6e-64 243.0
Cme07g01023 . 1 187 MADS-box Gene Family AT1G26310 64.6 3.2e-60 228.8
Cme03g01462 . 1 166 MADS-box Gene Family AT1G26310 64.0 1.1e-55 213.8
Cme11g02324 . 1 208 MADS-box Gene Family AT1G26310 50.7 1.4e-44 176.8
Cme07g01021 . 1 173 MADS-box Gene Family AT1G26310 53.4 4.3e-41 165.2
Cme11g02532 . 1 155 MADS-box Gene Family AT1G26310 59.4 5.6e-41 164.9
Cme03g01461 . 1 142 MADS-box Gene Family AT1G26310 60.0 1.4e-39 160.2
Cme12g01921 . 1 174 MADS-box Gene Family AT1G26310 53.4 1.4e-39 160.2
Cme08g00190 CCT 17 192 MADS-box Gene Family AT4G09960 72.7 3.9e-65 245.0
Cme12g01251 CCT 26 211 MADS-box Gene Family AT4G09960 69.4 1.2e-63 240.0
Cme11g02532 . 1 245 MADS-box Gene Family AT3G61120 53.6 2.1e-61 232.6
Cme11g02324 . 1 170 MADS-box Gene Family AT3G61120 55.8 2.4e-41 166.0
Cme06g00946 . 1 166 MADS-box Gene Family AT3G61120 51.2 3.2e-41 165.6
Cme06g00227 . 1 219 MADS-box Gene Family AT4G11880 55.0 7.5e-50 194.1
Cme11g02531 . 1 214 MADS-box Gene Family AT4G11880 50.7 2.3e-46 182.6
Cme09g01706 . 1 143 MADS-box Gene Family AT4G11880 68.1 1.6e-44 176.4
Cme06g00949 CCT,ECH 1 190 MADS-box Gene Family AT4G11880 53.9 1.5e-42 169.9
Cme09g01472 CCT,ECH 1 156 MADS-box Gene Family AT4G11880 61.1 2.0e-39 159.5
Cme07g02236 . 1 160 MADS-box Gene Family AT2G22630 66.3 6.7e-54 207.6
Cme08g00712 . 1 160 MADS-box Gene Family AT2G22630 66.9 1.3e-52 203.4
Cme08g01507 . 18 195 MADS-box Gene Family AT3G57390 51.1 1.5e-40 163.3
Cme06g00227 . 1 219 MADS-box Gene Family AT4G22950 54.3 2.1e-52 202.6
Cme11g02531 . 1 214 MADS-box Gene Family AT4G22950 54.8 3.9e-51 198.4
Cme09g01706 . 1 143 MADS-box Gene Family AT4G22950 67.8 8.5e-46 180.6
Cme06g00949 CCT,ECH 1 190 MADS-box Gene Family AT4G22950 52.6 1.1e-42 170.2
Cme09g01472 CCT,ECH 1 153 MADS-box Gene Family AT4G22950 62.1 7.4e-42 167.5
Cme11g02531 . 1 162 MADS-box Gene Family AT2G45660 68.5 2.0e-52 202.2
Cme06g00227 . 1 162 MADS-box Gene Family AT2G45660 66.7 9.8e-52 199.9
Cme09g01706 . 1 143 MADS-box Gene Family AT2G45660 67.8 2.1e-46 182.2
Cme09g01472 CCT,ECH 1 157 MADS-box Gene Family AT2G45660 65.0 3.6e-46 181.4
Cme06g00949 CCT,ECH 1 160 MADS-box Gene Family AT2G45660 58.8 2.7e-41 165.2
Cme07g02236 . 1 155 MADS-box Gene Family AT4G37940 67.1 4.9e-54 208.0
Cme08g00712 . 1 155 MADS-box Gene Family AT4G37940 67.7 2.4e-53 205.7
Cme08g00728 . 1 228 MADS-box Gene Family AT2G22540 64.0 6.4e-71 264.2
Cme03g01799 . 1 227 MADS-box Gene Family AT2G22540 53.4 2.9e-55 212.2
Cme08g00728 . 1 225 MADS-box Gene Family AT4G24540 58.0 1.0e-59 226.9
Cme03g01799 . 1 227 MADS-box Gene Family AT4G24540 55.0 4.8e-57 218.0
Cme09g01472 CCT,ECH 1 145 MADS-box Gene Family AT5G62165 67.6 6.4e-48 187.2
Cme06g00949 CCT,ECH 1 147 MADS-box Gene Family AT5G62165 61.9 7.3e-44 173.7
Cme09g01706 . 1 150 MADS-box Gene Family AT5G62165 60.7 3.1e-42 168.3
Cme11g02531 . 1 154 MADS-box Gene Family AT5G62165 57.1 4.0e-42 167.9
Cme06g00227 . 1 146 MADS-box Gene Family AT5G62165 58.9 8.9e-42 166.8
Cme07g02236 . 1 142 MADS-box Gene Family AT2G14210 76.9 2.6e-56 215.7
Cme08g00712 . 1 142 MADS-box Gene Family AT2G14210 68.5 1.4e-46 183.3
Cme08g00155 . 49 165 MADS-box Gene Family AT1G29960 56.4 1.3e-38 156.0
Cme09g01472 CCT,ECH 1 144 MADS-box Gene Family AT5G51870 57.3 4.0e-39 158.3
Cme06g00949 CCT,ECH 1 146 MADS-box Gene Family AT5G51870 54.8 5.3e-39 157.9
Cme09g01472 CCT,ECH 1 153 MADS-box Gene Family AT5G51860 56.4 6.4e-40 161.0
Cme12g01920 . 1 195 MADS-box Gene Family AT3G30260 57.4 1.6e-48 189.9
Cme03g01462 . 1 198 MADS-box Gene Family AT3G30260 51.5 1.6e-40 163.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000605 4 3 4 7 5 3 4 3 3 2 2 3 4 3 3 5 3 1 5 3 2 3 3 3 3 2 3 6 4 4 103
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41638 PF01486 K-box 6.20E-29 No_clan Cme TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cme07g01023 Cme_Chr07 FPKM 11.58875 13.67876 176.82106 189.447006 11.554745 8.440119 13.06711 119.14431 126.48735 134.567078