Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01081 ATGTCGCCTGCTGATTCTTCACGGGAGGAAAATGTTTACATGGCCAAGTTGGCCGAACAGGCCGAACGATATGAGGAAATGGTAGAGTTCATGGAGAAAGTTGCCAAGACTGTGGATGTCGAGGAGCTTACTGTTGAGGAGAGGAATCTCCTCTCCGTTGCTTACAAGAATGTCATTGGGGCTCGGAGGGCTTCATGGAGGATTATTTCTTCCATTGAGCAGAAGGAAGAGAGTCGGGGAAATGAGGACCATGTTTCAATTATCAAGGATTACCGTGGCAAAATCGAGACTGAACTGAGCAAGATCTGTGATGGAATTTTGAGCCTCCTTGAGTCTCATCTCATTCCATCAGCCTCATCTGCTGAGTCAAAGGTGTTTTATCTCAAAATGAAAGGTGATTACCACAGGTACCTGGCTGAGTTTAAGACTGGAGCTGAAAGGAAAGAAGCAGCTGAGAGCACATTGTTAGCCTACAAGTCTGCTCAGGATATTGCTCTTGCGGAATTAGCCCCTACTCATCCAATTAGGCTAGGTCTTGCTCTTAACTTCTCAGTGTTTTATTATGAGATCCTTAATTCGCCAGATCGAGCTTGCAATTTGGCAAAGCAGGCTTTTGACGAAGCAATTTCTGAGCTTGACACATTGGGTGAAGAATCATACAAGGATAGCACCTTGATCATGCAACTCCTCCGAGACAACTTGACTCTTTGGACTTCTGATATCGGGGATGAAGCTGGCGATGAGATTAAGGAAGCATCAAAACGTGAATCAGGGGAGGGACATGGACAGTAG 792 45.58 MSPADSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSIIKDYRGKIETELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRESGEGHGQ 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13451281 13453655 + MELO3C018934.2.1 Cme07g01081 333097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01081 263 PIRSF 14-3-3 3 250 IPR000308 -
Cme07g01081 263 PANTHER 14-3-3 PROTEIN 5 257 IPR000308 -
Cme07g01081 263 Pfam 14-3-3 protein 14 238 IPR023410 -
Cme07g01081 263 Gene3D - 2 251 IPR036815 -
Cme07g01081 263 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cme07g01081 263 Coils Coil 14 34 - -
Cme07g01081 263 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Cme07g01081 263 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cme07g01081 263 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Cme07g01081 263 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cme07g01081 263 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cme07g01081 263 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cme07g01081 263 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cme07g01081 263 SMART 1433_4 8 251 IPR023410 -
Cme07g01081 263 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cme07g01081 263 PANTHER 14-3-3-LIKE PROTEIN GF14-F 5 257 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01784 Cme-Chr3:26329881 Cme07g01081 Cme-Chr7:13451281 3.06E-20 dispersed
Cme03g01863 Cme-Chr3:26886991 Cme07g01081 Cme-Chr7:13451281 4.63E-118 dispersed
Cme04g00274 Cme-Chr4:2168966 Cme07g01081 Cme-Chr7:13451281 4.33E-160 dispersed
Cme07g01081 Cme-Chr7:13451281 Cme10g00363 Cme-Chr10:2337132 1.52E-130 dispersed
Cme07g01081 Cme-Chr7:13451281 Cme03g01852 Cme-Chr3:26800080 2.55E-164 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01081 K06630 - csv:101222068 511.916