Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01163 ATGGCCGACGCTGCTGAATTTGAGCGCCCCGACCTCAATTGTGGCCTTGCTTCCATGGATTCCTCCGAGTCCCGTTGGGTTTTCCAGGACGATGACCATTCCGAGATCGACGACTACGACGACGACGACGACCCCCACGATAATGCTGCCCGTCATTCTATGGATTTGGAATCTGAGGATGAAGATAATGTCGAGCAGAAATTGATTCGGACTGGCCCACGTATTGATTCTTTCGATGTCGAAGCCCTTGATGTCCCTGGTGCACATAGAAATGAATACGAGGACTTCAGCGTGGGAAAGAAAATTGCTCTTGCTTTTCAGACTCTTGGAGTTGTATTTGGTGATGTTGGGACAAGTCCTTTGTATACCTTCAGTGTCATGTTCAACAAAGTTCCTATTAAGGGAGATGAAGATGTTATCGGGGCATTATCGCTTGTTATCTACACCTTAATCTTGATTTCACTAGTCAAGTATGTTCTTGTTGTTCTTCTGGCAAATGATGATGGTGAAGGTGGTACTTTTGCGCTGTACTCTTTGATTTGTAGACATGCCAAGGTCAGTCTACTCCCGAATCAACTGCCTTCGGATACCCGAATATCAAGTTTTAGATTAAAGGTGCCATCAGCTGAATTGGAAAGATCACTAAAAATAAAGGAAAAACTTGAGGCTTCCCTGACCTTAAAGAAGCTTCTTTTGATGCTTGTTCTTGCTGGAACTGCTATGGTAATAGCCGATGGAGTTGTTACACCAGCAATGTCAGTAATGTCAGCTGTTGGTGGACTAAAGATTGGAGTGGATGCAATCAATCAAGATGAGGCTGTGATGATCTCAGTTGCCTGTCTTATAATTTTGTTCAGTGTTCAGAAGTATGGCACTAGCAAAGTGGGGCTCGCTGTTGGTCCTGCATTATTTATATGGTTTTGTACACTTGCAGGCATCGGGATATATAACCTTGTCGTATATGATAGCAGTGTATTAAAGGCATTCAATCCTGTTCATATTTACTATTTCTTTAAAAGGAACTCTACCAATGCATGGTATTGCCTTGGAGGTTGTCTTTTATGTGCTACAGGTTCCGAGGCAATGTTTGCAGATCTTTGCTATTTCTCCGTCCGGTCAATACAGCTTACGTTTGTGTTTCTCGTCTTGCCTTGTCTTTTCTTGGGTTATTTGGGTCAAGCTGCCTACCTTATATCAAACCAAAATGGAGCTGAGCACGTATTTTTTAATTCTGTTCCCAAAAGTGCTTTTTGGCCAGTTTTTCTCATTGCTAACGTTGCTGCATTGATTGCTAGTCGGGCAATGACTACAGCTACCTTTTCATGTATAAAACAATCAACAGCACTTGGTTGTTTTCCTCGTCTTAAGATTATTCATACATCTAGGAAATTCATGGGGCAGATCTATATCCCGGTGTTGAATTGGTTTTTGTTGGCTGTCTGCCTGGTGGTTGTCTGCTCCATATCTAGCATGTATGAGATTGGAAATGCATATGGTATTGCTGAGCTGGGAGTGATGATGATGACAACCGTCTTGGTTACCATTGTTATGCTTCTTATATGGCAGATAAACATTATCATTGTGATGGGTTTTGCGATGATCTTTCTTGGGATAGAACTGATATTTTTCTCGTCAGTATTATGGGGTGTGGGTGATGGAAGTTGGATCATATTGGTATTCGCAGTAATTATGTTTTTCATTATGTCTATTTGGAACTACGGAAGCAAGCTCAAGTATGAAACTGAAGTAAAACAAAAGCTGTCAATGGATTTAATGCGAGAACTTGGGTGCAATCTCGGGACAATCAGAGCTCCTGGCATTGGTTTGCTCTATAATGAACTAGTGAAAGGAATACCTGCAATATTTGGCCATTTTCTTACTACTCTTCCTGCGGTTCATTCAATGATCATATTTGTCTGCATCAAATATGTACCGGTTCCTGTTGTGCCTCAGAGTGAGAGATTTCTTTTCCGCCGAGTCTGTCCAAAGAGCTATCACATCTTTCGTTGCATTGCCAGGTATGGTTACAAGGATGTTCGAAAAGAAAATCATCAGACATTTGAGCAGCTCTTAATTGAAAGCCTCGAGAAATTCATCCGTCGAGAAGCACAAGAAAGGTCATTAGAGAGCGATGGAGATGACGACACTGATACCGATGAGACCCGGTGCTCGCGACTTCTCGTGGGTCCGAATGGAAGTGTGTATTCACTTGGGATTCCTCTCCTTGCTGAATTTAACGAGATCACTAGACCGATAACTGAAGTCCTTAACGTTCCAGAAGAGGTGCAGGCAGTGGAATCCCCAGACCCCTCTATCCCAGATGCAGAGCAATCACTTGAGAGAGAGCTTTCTTTTATACGAAAGGCTAAAGAATCAGGAGTGGTTTACCTTCTTGGTCATGGAGATATTAGAGCAAGAAAGGACTCTTGGTTTATTAAGAAGCTAATCATCAATTACTTCTATGCATTTTTAAGAAAGAACAGCAGAAGAGGTATTGCCAACTTGAGTGTTCCCCACACCCATCTGATGCAGGTTGGCATGACGTACATGGTTTAG 2556 42.37 MADAAEFERPDLNCGLASMDSSESRWVFQDDDHSEIDDYDDDDDPHDNAARHSMDLESEDEDNVEQKLIRTGPRIDSFDVEALDVPGAHRNEYEDFSVGKKIALAFQTLGVVFGDVGTSPLYTFSVMFNKVPIKGDEDVIGALSLVIYTLILISLVKYVLVVLLANDDGEGGTFALYSLICRHAKVSLLPNQLPSDTRISSFRLKVPSAELERSLKIKEKLEASLTLKKLLLMLVLAGTAMVIADGVVTPAMSVMSAVGGLKIGVDAINQDEAVMISVACLIILFSVQKYGTSKVGLAVGPALFIWFCTLAGIGIYNLVVYDSSVLKAFNPVHIYYFFKRNSTNAWYCLGGCLLCATGSEAMFADLCYFSVRSIQLTFVFLVLPCLFLGYLGQAAYLISNQNGAEHVFFNSVPKSAFWPVFLIANVAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAVCLVVVCSISSMYEIGNAYGIAELGVMMMTTVLVTIVMLLIWQINIIIVMGFAMIFLGIELIFFSSVLWGVGDGSWIILVFAVIMFFIMSIWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAVHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDTDTDETRCSRLLVGPNGSVYSLGIPLLAEFNEITRPITEVLNVPEEVQAVESPDPSIPDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLIINYFYAFLRKNSRRGIANLSVPHTHLMQVGMTYMV 851
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15422628 15439462 + MELO3C019015.2.1 Cme07g01163 333179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01163 851 PANTHER POTASSIUM TRANSPORTER 7 21 850 - -
Cme07g01163 851 Pfam K+ potassium transporter 105 678 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme07g01163 851 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 21 850 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme07g01163 851 MobiDBLite consensus disorder prediction 45 63 - -
Cme07g01163 851 MobiDBLite consensus disorder prediction 1 63 - -
Cme07g01163 851 TIGRFAM kup: potassium uptake protein 104 851 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01163 Cme-Chr7:15422628 Cme10g01737 Cme-Chr10:24470807 0 dispersed
Cme07g01163 Cme-Chr7:15422628 Cme04g01908 Cme-Chr4:26778147 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01163 - - csv:101214942 1598.56