Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme07g01183 | ATGCTTGCAGTTTGCGAGAAAGTGGAGAGTAAGGGAAGAACGACATATAACGAGGTTGCAGATGAACTTGTCGCAGAGTTTGCTGATCCTGGCAACAGTGTTGCATCGCCAGATCAGCAGCAACAGTACGACGAAAAAAATATTAGGCGGAGGGTATATGATGCCCTGAATGTCCTCATGGCAATGGATATTATATCAAAGGATAAGAAGGAGATACAATGGAAGGGTCTACCACGTACCAGCGTGAATGATATTGAAGAACTAAAGGCAGAGCGTCTTGGACTTCGAAATAGGATTGAAAAGAAAGCAGCATACTTGCAAGAGTTGGAGGAACAGTATGTAGGTCTTCAGAACCTAATACAGCGAAACGAACAATTATTCAGTTCGGAGAATGCCCCCAGTGGTGGCGTGTCTTTGCCTTTCATCCTGGTGCAGACGAGGCCTCATGCAACTGTTGAGATAGAAATTTCAGAAGATATGCAGCTGGTGCATTTTGATTTCAACAGTACTCCCTTTGAGCTCCATGATGACAATTATGTTTTGAAGGCGATGAAATTTTGCAACAGACCGCAATGCGATAATACAGCACAAAATTTTACTCCTGATGGTGGGGAGGGTTCTAGCATGTCAGGCATGTATCAACCACCCCATATGCCTATTCCTTCGTTGTCTAACACGCCGGTTAGAACACCAACCTCACCCCCACTTCCTGGAATCATAAAAGCTCGCGTCAAACACGAACATTAA | 747 | 44.44 | MLAVCEKVESKGRTTYNEVADELVAEFADPGNSVASPDQQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSVNDIEELKAERLGLRNRIEKKAAYLQELEEQYVGLQNLIQRNEQLFSSENAPSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCNRPQCDNTAQNFTPDGGEGSSMSGMYQPPHMPIPSLSNTPVRTPTSPPLPGIIKARVKHEH | 248 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 15942813 | 15947824 | + | MELO3C019031.2.1 | Cme07g01183 | 333199 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme07g01183 | 248 | Pfam | E2F/DP family winged-helix DNA-binding domain | 4 | 76 | IPR003316 | GO:0005667|GO:0006355 | |
Cme07g01183 | 248 | SUPERFAMILY | E2F-DP heterodimerization region | 83 | 196 | IPR037241 | - | |
Cme07g01183 | 248 | SUPERFAMILY | Winged helix DNA-binding domain | 3 | 77 | IPR036390 | - | |
Cme07g01183 | 248 | Pfam | Transcription factor DP | 84 | 191 | IPR014889 | - | |
Cme07g01183 | 248 | SMART | DP_2 | 83 | 246 | IPR014889 | - | |
Cme07g01183 | 248 | Gene3D | Transcription factor DP | 82 | 204 | IPR038168 | - | |
Cme07g01183 | 248 | PANTHER | TRANSCRIPTION FACTOR DP | 3 | 248 | IPR015648 | GO:0005667|GO:0051726 | |
Cme07g01183 | 248 | PIRSF | Txn_factor_DP | 2 | 248 | IPR015648 | GO:0005667|GO:0051726 | |
Cme07g01183 | 248 | SMART | E2F_TDP_2 | 4 | 76 | IPR003316 | GO:0005667|GO:0006355 | |
Cme07g01183 | 248 | CDD | DP_DD | 81 | 184 | IPR014889 | - | |
Cme07g01183 | 248 | Coils | Coil | 92 | 126 | - | - | |
Cme07g01183 | 248 | Gene3D | - | 1 | 81 | IPR036388 | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
41643 | PF08781 | DP | 1.50E-41 | No_clan | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme07g01183 | K04683 | - | csv:101216863 | 489.189 |