Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01183 ATGCTTGCAGTTTGCGAGAAAGTGGAGAGTAAGGGAAGAACGACATATAACGAGGTTGCAGATGAACTTGTCGCAGAGTTTGCTGATCCTGGCAACAGTGTTGCATCGCCAGATCAGCAGCAACAGTACGACGAAAAAAATATTAGGCGGAGGGTATATGATGCCCTGAATGTCCTCATGGCAATGGATATTATATCAAAGGATAAGAAGGAGATACAATGGAAGGGTCTACCACGTACCAGCGTGAATGATATTGAAGAACTAAAGGCAGAGCGTCTTGGACTTCGAAATAGGATTGAAAAGAAAGCAGCATACTTGCAAGAGTTGGAGGAACAGTATGTAGGTCTTCAGAACCTAATACAGCGAAACGAACAATTATTCAGTTCGGAGAATGCCCCCAGTGGTGGCGTGTCTTTGCCTTTCATCCTGGTGCAGACGAGGCCTCATGCAACTGTTGAGATAGAAATTTCAGAAGATATGCAGCTGGTGCATTTTGATTTCAACAGTACTCCCTTTGAGCTCCATGATGACAATTATGTTTTGAAGGCGATGAAATTTTGCAACAGACCGCAATGCGATAATACAGCACAAAATTTTACTCCTGATGGTGGGGAGGGTTCTAGCATGTCAGGCATGTATCAACCACCCCATATGCCTATTCCTTCGTTGTCTAACACGCCGGTTAGAACACCAACCTCACCCCCACTTCCTGGAATCATAAAAGCTCGCGTCAAACACGAACATTAA 747 44.44 MLAVCEKVESKGRTTYNEVADELVAEFADPGNSVASPDQQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSVNDIEELKAERLGLRNRIEKKAAYLQELEEQYVGLQNLIQRNEQLFSSENAPSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCNRPQCDNTAQNFTPDGGEGSSMSGMYQPPHMPIPSLSNTPVRTPTSPPLPGIIKARVKHEH 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15942813 15947824 + MELO3C019031.2.1 Cme07g01183 333199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01183 248 Pfam E2F/DP family winged-helix DNA-binding domain 4 76 IPR003316 GO:0005667|GO:0006355
Cme07g01183 248 SUPERFAMILY E2F-DP heterodimerization region 83 196 IPR037241 -
Cme07g01183 248 SUPERFAMILY Winged helix DNA-binding domain 3 77 IPR036390 -
Cme07g01183 248 Pfam Transcription factor DP 84 191 IPR014889 -
Cme07g01183 248 SMART DP_2 83 246 IPR014889 -
Cme07g01183 248 Gene3D Transcription factor DP 82 204 IPR038168 -
Cme07g01183 248 PANTHER TRANSCRIPTION FACTOR DP 3 248 IPR015648 GO:0005667|GO:0051726
Cme07g01183 248 PIRSF Txn_factor_DP 2 248 IPR015648 GO:0005667|GO:0051726
Cme07g01183 248 SMART E2F_TDP_2 4 76 IPR003316 GO:0005667|GO:0006355
Cme07g01183 248 CDD DP_DD 81 184 IPR014889 -
Cme07g01183 248 Coils Coil 92 126 - -
Cme07g01183 248 Gene3D - 1 81 IPR036388 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41643 PF08781 DP 1.50E-41 No_clan Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01183 K04683 - csv:101216863 489.189