Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01286 ATGGAGGATTATCATGTTGCTCAATTTATTACCGTGCACGGCCGTGAGCTAGGTCTTTTTGCTATATATGATGGACATTTAGGAGACAGCGTGCCCGCCTATCTACAGAAGCATCTATTTCCTAATATACTGAAGGATGTAAGTTCTTCGCTAGGTGCAATTATTGTTTCGTTAAGATGGCAATTATCAATTATCAGCAATCACTACTGGCAAAAGTCATTTGGAAATAAGATTAATCCGTTCAAAAGTTTCAGATGTTTTTTTATCCTTCATGAATGCTGGTTAGGAAAATGTTCACTGACATTTTGGTATGATATCTTGCCATTGCTTAAGGAGGAATTCTGGTCAAATCCCCGTAGCTCCATCTTTAAGGCTTACGAGAAGACAGACCAAGCAATACTCTCACACAGTCCTGACTTAGGAAGAGGTGGATCCACTGCCGTCACTGCAATTTTGATTAACGGTCAGAAATTATGGGTGGCTAATGTTGGAGATTCACGGGCAGTCCTATCAAAAAAAGGGCAGGAAATGCAAATGTCTGTTGATCACGAGCCAAACGCTGAGCGAGAAAGTATTGAGGATAGAGGTGGCTTTGTCTCTAACATGCCAGGAGATGTTGCAAGGGTGAATGGTCAGCTTGCAGTTTCTCGAGCATTCGGCGACAAGAACCTCAAGACACACTTGCGATCTGATCCAGACATAAGGAATGCCAATGTTGACTCTGACACTGAGCTTCTGATCTTAGCAAGTGATGGTCTATGGAAGGTGATGACAAATCAAGAAGCCGTGGATATAGCAAGAAAAACCAAGGATCCCCAGAGAGCAGCAAAACATTTAGCAGCAGAAGCACTGAAAAGGGAAAGCAAAGATGACATCTCAATCATCGTAGTTCGTTTCAAAGGGTAA 906 42.27 MEDYHVAQFITVHGRELGLFAIYDGHLGDSVPAYLQKHLFPNILKDVSSSLGAIIVSLRWQLSIISNHYWQKSFGNKINPFKSFRCFFILHECWLGKCSLTFWYDILPLLKEEFWSNPRSSIFKAYEKTDQAILSHSPDLGRGGSTAVTAILINGQKLWVANVGDSRAVLSKKGQEMQMSVDHEPNAERESIEDRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIRNANVDSDTELLILASDGLWKVMTNQEAVDIARKTKDPQRAAKHLAAEALKRESKDDISIIVVRFKG 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17917710 17922317 - MELO3C024805.2.1 Cme07g01286 333302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01286 301 ProSiteProfiles PPM-type phosphatase domain profile. 1 299 IPR001932 -
Cme07g01286 301 Pfam Protein phosphatase 2C 115 292 IPR001932 -
Cme07g01286 301 SMART PP2C_4 2 297 IPR001932 -
Cme07g01286 301 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 46 - -
Cme07g01286 301 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 109 300 - -
Cme07g01286 301 SUPERFAMILY PP2C-like 1 300 IPR036457 -
Cme07g01286 301 CDD PP2Cc 1 299 IPR001932 -
Cme07g01286 301 PANTHER PROTEIN PHOSPHATASE 2C 1 46 IPR015655 GO:0004722|GO:0006470
Cme07g01286 301 PANTHER PROTEIN PHOSPHATASE 2C 109 300 IPR015655 GO:0004722|GO:0006470
Cme07g01286 301 Gene3D - 1 301 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme07g00584 Cme07g01286 CCT
Cme07g00584 Cme07g01286 ECH
Cme07g01286 Cme07g00584 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00287 Cme-Chr4:2251536 Cme07g01286 Cme-Chr7:17917710 3.51E-107 dispersed
Cme07g01286 Cme-Chr7:17917710 Cme08g00077 Cme-Chr8:529928 2.91E-08 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01286 K17506 - csv:101214223 367.081