Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme07g01328 | ATGAGTCCAGCAAACTGTTTTTGGACAATATTCAAGCAAAGGAAGGTGAAACGTGTTACAAGCAATGGAGAACAGGTACACGTAAAGACGGGAAAATCCAATGGTTTCCCTCATGGAAAGAGTGAAGATCTAGCTGCAACTCGAATTCAAAATGCATTTCGTACATTTACGGCTAGAAAGGACGTACATAATTCGAAAGTGCCAGAGAGATGCCAGGATCTAGTTCAAGGTGAAACGGCTACAAAACAAGTGTCAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAGCACGTAGACTCTGTATGGTCACAGAATATCGAGTCAAGCAAAAGAAACTAGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAGGCAGAATGGTCCGGTGGGTCAGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCAACGAGAAGAAGCTGCTGTAAGACGGGAGCGGGCTATGGCTTACGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTGAGCCCGGCTTCGTACAGCCTTGACAAAGAAAACTGGGGATGGAGCTGGAAGGAGAGATGGATTGCTGCTCGGCCCTGGGAGATCCGAGCTAATACTCATCCCACTATTCCAAAGAAGGTGCAGACGAAACAAACAAGCAAAGTCAATAAAGTGACATATCAATCGGGGTTGAAGGTCTCAAACTTAGCTGGACATTCTTCGTTGAACAGCAAGGGGAGTTCAAAGGCCAAAAATTCTGCTATATCCAATTGCTGA | 786 | 44.15 | MSPANCFWTIFKQRKVKRVTSNGEQVHVKTGKSNGFPHGKSEDLAATRIQNAFRTFTARKDVHNSKVPERCQDLVQGETATKQVSSFIHSWSRMQQEIRARRLCMVTEYRVKQKKLENQLKLEAKIHELEAEWSGGSETKEEILFKIQQREEAAVRRERAMAYAFSHQWRANSILDLSPASYSLDKENWGWSWKERWIAARPWEIRANTHPTIPKKVQTKQTSKVNKVTYQSGLKVSNLAGHSSLNSKGSSKAKNSAISNC | 261 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 18718264 | 18722436 | + | MELO3C016091.2.1 | Cme07g01328 | 333344 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme07g01328 | 261 | PANTHER | IQ-DOMAIN 5-RELATED | 23 | 247 | - | - | |
| Cme07g01328 | 261 | MobiDBLite | consensus disorder prediction | 241 | 261 | - | - | |
| Cme07g01328 | 261 | Coils | Coil | 112 | 132 | - | - | |
| Cme07g01328 | 261 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 23 | 247 | - | - | |
| Cme07g01328 | 261 | ProSiteProfiles | IQ motif profile. | 42 | 70 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme07g01328 | Cme-Chr7:18718264 | Cme08g00247 | Cme-Chr8:1613196 | 2.01E-68 | dispersed | |
| Cme07g01328 | Cme-Chr7:18718264 | Cme10g00057 | Cme-Chr10:431699 | 1.37E-33 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme07g01328 | - | - | csv:101206595 | 464.536 |