Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01416 AAGATAAAAACAAAATTCTTTTGTTATTTCATATCTTTACCATTAAAATGTGTCCACTGCATTCCATATCTCAGAAGTTTTAATTTGTTGTCATTTTTGGGGAATAAGATGGGGGAGGAAGTGAAATTATTGGATTTTTGGGGAAGCATGTTTGGGATGAGAATTAGAATAGCTATGGCAGAGAAGGGTGTGAGTTATGTATATGTTGAAGAAGATCTGAGGAATAAGAGCGATTTGCTTCTTCAAATGAACCCAATTCACAAGAAAATCCCTGTTTTTATTCATAATGGAAAACCCATTTGTGAATCTTCCATTATCCTTCAGTATATTGATGAAGTTTGGAAGGATAAAGCTCCTAATCTGTTGCCCTTGCATCCTTACGACAGAGCTCAAGCCAAATTCTGGGTGGATTTCATCGACAAGAAGCTATATGATGGTGCAAAGAAGATATGGGCAGGGAAAGGAGAGGAACGTGAGGAAGGGAAGAAGGAGGTGATAGAAGTACTGAAGCAATTGGAACAAGTTCTTGGGGACAAGACTTACTTTGGAGGTAAGAGTTTGGGATTTGTAGACATTGGTTTGATTGGATACTACACTTGGTTTTATACCTACGAGACCATTGGCAACTTCAGCATTGAATCTGAGTGTCCAAAGATAATGAGTTGGGTAAAGAGATGCTTGCAAAATGAGAGTGTGGCTAAGTCCTTGCCTGACCCCAACAATGTCTATCAATTTGTGGTTGAATGGAAGAAAAGTTTTGGGCTTGACTAA 771 38.39 KIKTKFFCYFISLPLKCVHCIPYLRSFNLLSFLGNKMGEEVKLLDFWGSMFGMRIRIAMAEKGVSYVYVEEDLRNKSDLLLQMNPIHKKIPVFIHNGKPICESSIILQYIDEVWKDKAPNLLPLHPYDRAQAKFWVDFIDKKLYDGAKKIWAGKGEEREEGKKEVIEVLKQLEQVLGDKTYFGGKSLGFVDIGLIGYYTWFYTYETIGNFSIESECPKIMSWVKRCLQNESVAKSLPDPNNVYQFVVEWKKSFGLD 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19876336 19877499 + MELO3C032562.2.1 Cme07g01416 333432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01416 256 SUPERFAMILY GST C-terminal domain-like 112 251 IPR036282 -
Cme07g01416 256 PANTHER GLUTATHIONE S-TRANSFERASE PARC-RELATED 39 247 - -
Cme07g01416 256 SFLD Glutathione Transferase (cytosolic) 37 253 IPR040079 -
Cme07g01416 256 SFLD Main.3: Omega- and Tau-like 37 253 IPR045073 -
Cme07g01416 256 Pfam Glutathione S-transferase, N-terminal domain 40 112 IPR004045 -
Cme07g01416 256 CDD GST_C_Tau 126 246 IPR045074 GO:0004364|GO:0006749
Cme07g01416 256 CDD GST_N_Tau 41 114 - -
Cme07g01416 256 Gene3D - 125 256 - -
Cme07g01416 256 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 39 118 IPR004045 -
Cme07g01416 256 SUPERFAMILY Thioredoxin-like 41 144 IPR036249 -
Cme07g01416 256 Pfam Glutathione S-transferase, C-terminal domain 152 228 IPR004046 -
Cme07g01416 256 Gene3D Glutaredoxin 37 123 - -
Cme07g01416 256 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 39 247 IPR045073 -
Cme07g01416 256 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 125 253 IPR010987 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01416 Cme-Chr7:19876336 Cme07g01419 Cme-Chr7:19912191 1.48E-120 dispersed
Cme07g01416 Cme-Chr7:19876336 Cme07g01417 Cme-Chr7:19882147 8.61E-100 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01416 K00799 - csv:101218323 424.476