Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme07g01417 | ATGGCGGACGAAGTGAAAATCCTGGATTTCTGGCCCAGCATGTTTGGGATGAGAGTTAGAGTAGCTTTGGCAGAGAAGGGTGTGGGTTATGAGTGTATCGAAGAAGATCTGAGTAACAAGAGCCCTTTGCTTCTTCAAATGAATCCAATTCATAAGAAAATCCCAGTTCTTATTCATAATGGAAAACCCATTTGTGAATCTGCCATTATTGTTGAGTATATCGATGAATTTTGGAATGACAGGGCTCCTCTGTTGCCGTCCGATCCTTATGAACGAGCTCAAGCCAGATTTTGGGTTGATTTCATCGATAAGAAGCTTTATGGAAGTGTGAGGAAGATATATGGTGGAAAAGGAGAGGAGCAAGAGGAAGGGAAAAAGGAGATGATGGAAATATTGAAGGAATTAGAAAAAGTGCTTGGAGAAAAGGATTATTTTGGAGGTGAATGTTTTGGAGTTTTAGACGTATCTTTGGTTGGATTTTCAACTTGGTTTGGTGGTTTAGAGAGCGTTGGAAATTTCAGCATTGAAACTGAGTGTCCAAAGTTAGTGAGTTGGGCGAAAAGATGTTCACAAAAGGAGAGCGTTTCTAAATCCCTACCTGACTCTAACAAGATTTCTGAGTTTATTGTTCAATTCAGGAAAAAGATTGTTGGGTAA | 657 | 39.73 | MADEVKILDFWPSMFGMRVRVALAEKGVGYECIEEDLSNKSPLLLQMNPIHKKIPVLIHNGKPICESAIIVEYIDEFWNDRAPLLPSDPYERAQARFWVDFIDKKLYGSVRKIYGGKGEEQEEGKKEMMEILKELEKVLGEKDYFGGECFGVLDVSLVGFSTWFGGLESVGNFSIETECPKLVSWAKRCSQKESVSKSLPDSNKISEFIVQFRKKIVG | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 19882147 | 19883857 | + | MELO3C016167.2.1 | Cme07g01417 | 333433 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme07g01417 | 218 | PANTHER | GLUTATHIONE S-TRANSFERASE PARC-RELATED | 4 | 211 | - | - | |
Cme07g01417 | 218 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 76 | IPR004045 | - | |
Cme07g01417 | 218 | SFLD | Main.3: Omega- and Tau-like | 2 | 216 | IPR045073 | - | |
Cme07g01417 | 218 | CDD | GST_N_Tau | 5 | 78 | - | - | |
Cme07g01417 | 218 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Cme07g01417 | 218 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 88 | 216 | IPR010987 | - | |
Cme07g01417 | 218 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 211 | IPR045073 | - | |
Cme07g01417 | 218 | SUPERFAMILY | GST C-terminal domain-like | 76 | 216 | IPR036282 | - | |
Cme07g01417 | 218 | SUPERFAMILY | Thioredoxin-like | 5 | 107 | IPR036249 | - | |
Cme07g01417 | 218 | Gene3D | - | 88 | 217 | - | - | |
Cme07g01417 | 218 | SFLD | Glutathione Transferase (cytosolic) | 2 | 216 | IPR040079 | - | |
Cme07g01417 | 218 | CDD | GST_C_Tau | 89 | 212 | IPR045074 | GO:0004364|GO:0006749 | |
Cme07g01417 | 218 | Pfam | Glutathione S-transferase, C-terminal domain | 122 | 188 | - | - | |
Cme07g01417 | 218 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme07g01417 | Cme-Chr7:19882147 | Cme07g01419 | Cme-Chr7:19912191 | 9.22E-126 | dispersed | |
Cme12g02002 | Cme-Chr12:25683525 | Cme07g01417 | Cme-Chr7:19882147 | 7.73E-35 | dispersed | |
Cme07g01416 | Cme-Chr7:19876336 | Cme07g01417 | Cme-Chr7:19882147 | 8.61E-100 | tandem | |
Cme07g01417 | Cme-Chr7:19882147 | Cme07g01418 | Cme-Chr7:19909789 | 2.77E-110 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme07g01417 | K00799 | - | csv:101218083 | 385.185 |