Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01418 ATGGCGGACCAAGTAAAGTTGTTGGATTTTTGGCCCAGCATGTTCGGGATGCGAGTCAGAGTAGCCCTTGCTCTGAAGTGCGTGCCCTACGAATATGTGGATGAAGATCTCACAAACAAGAGTCCTTTGCTTCTTCAAATGAACCCAATTCACAAGAAGATCCCTGTTCTTATTCATAACGGAAAACCCATTTGTGAATCTTCCATAATCGTCCAGTATATTGATGAATTTTGGAAGGATAAAGCTCCTCTTTTTCCGACTCATCCTTATGACAGAGCTCAGGCCAGATTTTGGGTTGATTTCATCGATAAGAAGCTTTTTGATAGTGGTCGGAAAGTTTGGGCTTGCAAAGGAGAGGAGCAAGAAGAAGGTAAAAAGGAGGTAATAAGAATATTGAAGCAGCTTGAAGAAGTAATCGAGGAGAAGGCTTACTTTGGAGGTGAATGTTTAGGATTTGTAGACATAGTTTTGATTGGATATTACACTTGGTTTTATGCCTATGAGACCATTGGAAACTTCAGCATTGAGTCCGAGTGTCCAAAGATAATGAGTTGGGTAAAGAGATGCTTACAAAATGAGAGTGTTTCTAAGTCCCTACCTGACCCCAAAAAGGTTTGTGATTTTGTGCTTCAAATGAAGAAAAAGTATGGGCTTTGA 657 40.49 MADQVKLLDFWPSMFGMRVRVALALKCVPYEYVDEDLTNKSPLLLQMNPIHKKIPVLIHNGKPICESSIIVQYIDEFWKDKAPLFPTHPYDRAQARFWVDFIDKKLFDSGRKVWACKGEEQEEGKKEVIRILKQLEEVIEEKAYFGGECLGFVDIVLIGYYTWFYAYETIGNFSIESECPKIMSWVKRCLQNESVSKSLPDPKKVCDFVLQMKKKYGL 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19909789 19911423 + MELO3C016168.2.1 Cme07g01418 333434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01418 218 Gene3D Glutaredoxin 1 87 - -
Cme07g01418 218 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Cme07g01418 218 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Cme07g01418 218 CDD GST_N_Tau 5 78 - -
Cme07g01418 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Cme07g01418 218 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Cme07g01418 218 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
Cme07g01418 218 Pfam Glutathione S-transferase, C-terminal domain 119 191 IPR004046 -
Cme07g01418 218 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Cme07g01418 218 SFLD Glutathione Transferase (cytosolic) 2 216 IPR040079 -
Cme07g01418 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 210 IPR045073 -
Cme07g01418 218 PANTHER GLUTATHIONE S-TRANSFERASE PARC-RELATED 4 210 - -
Cme07g01418 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cme07g01418 218 Gene3D - 88 218 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01418 Cme-Chr7:19909789 Cme09g01016 Cme-Chr9:14277346 2.60E-80 dispersed
Cme07g01417 Cme-Chr7:19882147 Cme07g01418 Cme-Chr7:19909789 2.77E-110 tandem
Cme07g01418 Cme-Chr7:19909789 Cme07g01419 Cme-Chr7:19912191 3.44E-127 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01418 K00799 - csv:101217848 432.18