Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01430 ATGACTTGCTTCCCTTTTTTGTTCAGCAAGAGGGTAAAACCCCCAACAAGAAGTTTGGTCGACGAAGAAGATTTTTCGAGCATGCAAAATGTTAAATTTTACACATACAAAGAGCTAAAAGTTGCAACCGAAGATTTCAGCTTGGCGAATAAAATAGGGGAGGGTGGTTTTGGTTCTGTCTACAAGGGAAAGCTAAAAGATGGAAAGATTGCTGCCATAAAAGTTCTTTCGGCTGAGTCAAGACAAGGATTGAGGGAATTCTTGACAGAAATTAATGTCATCTCTGAGATAGAACATGAAAATCTGGTTCAGCTTTATGGCTGCTGTGTGGACGATAATCATAGAATTCTTGTCTACAATTACCTTGAGAACAATAGCCTTGCACAAACTCTTCTTGGACGAGGTTACAGTAGCATCCTGTTTAATTGGCGAACAAGGTCTAAGATTTGCATTGGAATTGCACGTGGGCTTGCCTTCCTGCACGAGGATGTACAGCCACATATTATACATAGAGATATTAAAGCTAGCAACATTCTTCTCGATCACGACCTCTCTCCTAAAATTTCAGATTTTGGTCTTGCGAAGCTTATTCCAGCCAGCATGACTCACGTCAGTACACGAGTGGCAGGAACAATTGGTTACCTAGCTCCGGAATACGCAATAAGAGGGCAGGTGACAAGAAAATCAGACATCTACAGTTTCGGAGTCTTGCTTGTGGAAATAGTCAGCGGAAGATGGAACACTAATACACAATTACCAATTGGAGAACAATATCTTCTTGAAAGGACATGGAATCTTTATGAACGAGGAGAGCTTGTTCTCCTAGTTGATACATCCTTAAACGGGGACTTCGATGCTGAGGTGGCTTGTAAATATCTAAAGATTGGCCTACTTTGCACACAAGACAGTCCAAAACTTCGTCCATCCATGTCGACTGTGGTAAAGATGCTAACGGGCGAGATGAGTATCGAAGACAGAAAGATAACGAAACCGGGGCTGATTTCGGACTTCATGGATCTAAAAGTAAAGAATCCAGATGAAAAGAAAGGGAAAAGAGAAGAGGGGGTGTCTTCTGATAGTCTGTCCTCAGGATCAAACATCCTTGGAAATTCAACAATGTCATCTGAAGCCTCAACTGTTACAACAGCAACCTTCACTGCACAATATGACAGGAATACTTTCTCATCTGTACTGTGA 1197 41.6 MTCFPFLFSKRVKPPTRSLVDEEDFSSMQNVKFYTYKELKVATEDFSLANKIGEGGFGSVYKGKLKDGKIAAIKVLSAESRQGLREFLTEINVISEIEHENLVQLYGCCVDDNHRILVYNYLENNSLAQTLLGRGYSSILFNWRTRSKICIGIARGLAFLHEDVQPHIIHRDIKASNILLDHDLSPKISDFGLAKLIPASMTHVSTRVAGTIGYLAPEYAIRGQVTRKSDIYSFGVLLVEIVSGRWNTNTQLPIGEQYLLERTWNLYERGELVLLVDTSLNGDFDAEVACKYLKIGLLCTQDSPKLRPSMSTVVKMLTGEMSIEDRKITKPGLISDFMDLKVKNPDEKKGKREEGVSSDSLSSGSNILGNSTMSSEASTVTTATFTAQYDRNTFSSVL 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20005968 20010159 - MELO3C016179.2.1 Cme07g01430 333446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01430 398 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Cme07g01430 398 SUPERFAMILY Protein kinase-like (PK-like) 26 317 IPR011009 -
Cme07g01430 398 ProSiteProfiles Protein kinase domain profile. 46 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g01430 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Cme07g01430 398 MobiDBLite consensus disorder prediction 357 373 - -
Cme07g01430 398 Gene3D Transferase(Phosphotransferase) domain 1 122 331 - -
Cme07g01430 398 Pfam Protein kinase domain 48 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g01430 398 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 377 - -
Cme07g01430 398 MobiDBLite consensus disorder prediction 344 373 - -
Cme07g01430 398 SMART serkin_6 46 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g01430 398 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 2 377 - -
Cme07g01430 398 CDD STKc_IRAK 52 319 - -
Cme07g01430 398 Gene3D Phosphorylase Kinase; domain 1 18 121 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01430 Cme-Chr7:20005968 Cme08g02317 Cme-Chr8:30122970 5.36E-129 dispersed
Cme07g01430 Cme-Chr7:20005968 Cme07g01380 Cme-Chr7:19355066 1.93E-127 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65021 PF00069 Pkinase 2.20E-47 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01430 - - csv:101216433 749.584