Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01442 ATGGCGGTTGTGATATCACAGCGATTTTGGATGCCATCTTTGGAGTTTAGTCATCTTTGGAGAACTGTTTCTTACCATGGCTTTACAAACAATTATGGAAGAAACAACGATAAATTCATCAATGGCCTTCTTCCTCCAGGCTTCGATCAAAAATCCTGCTTAAGCCGATACCAACTCAACCTCATCAGAAAACCCTCTCCCCATAAACCCTCTTTCCCTCTCCTCTCAAAGCTCCGTCGCTACGAGGCTCTCCACCGTCGCTGTGGCCCCAATTCCCCATCGTTCCGTCAAGCCATTGTTCGTCTCACCTCACCCACCAACTCCACAGCCCCATCAGATGACTGCAAATACATTGTTATTCTAACTCGAGACGGACTCGGCAATCGGATCCTCTCCATTCTCTCTGCCTTCTTCTACGCTCTAATCTCCAATCGTGTCATTCTAATCAATCGAGGCAATACCCTCGAAGATCTCTTCTGTGAGCCCTTTCTTGAATCCTCATGGCTTCTTCCCTCAGATTTTCCTCTCCGGGACAAATTTGGGTCATTCCGTCAGTCCTTCCCAGAGTCTTTTGGGAATATTTTGAGGAATGGGATGCGGAAGAAAACAATCGAAGATTCACCTCCACCTTATTTGTATCTCCATCTCTCTCATGATGCCGGCGATTACGATAAGCTCTTTTACTGTGATCGACAACAAAATCTTTTGAAGAAGGTTCCATGGTTGATTATGGAGACGAATAACTACCTGGTTCCGGCAATTTTTTTGGTTTCTTCTTTTAGACAAGAGCTTAACGAACTCTTTCCGGCGAAGGACTCTGTGTTCCACCATCTTGGACGATACCTCTTCCACCCGAAGAACGACGTGTGGGGGCTGATTTTGAGATCTTACAAGCCATATGTTGCCCGAGCAAATGAAATGGTAGGGATTCAGATCCGAATTTTTGGATCGGAGTCCGGGTCGATTCAGGACCAAATGAAACAGATTCTAGCTTGTACACAGAAGAAGAAATTACTACCGGAGACCGAACTATCGTCGGCAGAGAAGGCGGATTCCTCCACTTCTCAGAAGGTGAAAGTTGTGTTGGTGACGTCTCTCAACTCTCAATACTCTGAAACACTGAAGGAGATGTATTGGGAGCATCCGACTGTCGACGGCGAGATGGTGGCGGTGTACCAGCCAAGCCACGAGGGGGTTCAGAGCTCCGATAGTAGGATACACAATCGGAAGGCACTGGCGGAAATGTACCTTTTGAGTTTGAGCGACGTGTTGGTGACGAGCGACTGGTCAACGTTTGGATATGTGGCACAGGGGCTGGCTGGAGTGAAGCCATGGATGCTTTACAAGGCGGAGGATAAGGTGTTTTGGGCGTTACAACACTGGCTAAAGTACAAAACGAGCAAGGAGAGGGGTGAAGATTGGCCTTGCCGGCAAGCGGTGTCGATGGAGCCGTGTCTTCAAGTGCCGCCGGTGTGCGATTGCGATGAGATGAAAAGAATGGATGGAGGGAAGGTTTTGCCTTACGTGATACATTGTGAAGATGCGAGTTGGGGCCTCAAATTAGGTTGA 1569 47.93 MAVVISQRFWMPSLEFSHLWRTVSYHGFTNNYGRNNDKFINGLLPPGFDQKSCLSRYQLNLIRKPSPHKPSFPLLSKLRRYEALHRRCGPNSPSFRQAIVRLTSPTNSTAPSDDCKYIVILTRDGLGNRILSILSAFFYALISNRVILINRGNTLEDLFCEPFLESSWLLPSDFPLRDKFGSFRQSFPESFGNILRNGMRKKTIEDSPPPYLYLHLSHDAGDYDKLFYCDRQQNLLKKVPWLIMETNNYLVPAIFLVSSFRQELNELFPAKDSVFHHLGRYLFHPKNDVWGLILRSYKPYVARANEMVGIQIRIFGSESGSIQDQMKQILACTQKKKLLPETELSSAEKADSSTSQKVKVVLVTSLNSQYSETLKEMYWEHPTVDGEMVAVYQPSHEGVQSSDSRIHNRKALAEMYLLSLSDVLVTSDWSTFGYVAQGLAGVKPWMLYKAEDKVFWALQHWLKYKTSKERGEDWPCRQAVSMEPCLQVPPVCDCDEMKRMDGGKVLPYVIHCEDASWGLKLG 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20116417 20119917 - MELO3C016188.2.1 Cme07g01442 333458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01442 522 Gene3D - 113 161 - -
Cme07g01442 522 Gene3D - 296 457 - -
Cme07g01442 522 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 458 521 - -
Cme07g01442 522 PANTHER FUCOSYLTRANSFERASE 2-RELATED 458 521 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cme07g01442 522 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 29 453 - -
Cme07g01442 522 Pfam Xyloglucan fucosyltransferase 26 494 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cme07g01442 522 PANTHER FUCOSYLTRANSFERASE 2-RELATED 29 453 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01442 Cme-Chr7:20116417 Cme12g01977 Cme-Chr12:25573140 1.17E-177 dispersed
Cme07g01442 Cme-Chr7:20116417 Cme10g00393 Cme-Chr10:2530034 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01442 K13681 - csv:101222105 979.163