Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01458 ATGCAAGGTCTCCAATGGCCTGGATTATTCCACATCCTCGCTTCTCGGCCAAAGAAAATCCAATCCCTTCGAATCTCCGGCTTCGGATCCTCTTCCGATTTGCTCCAATCAACAGGACGAAGACTCGCCGATTTCGCAACATCTCTAGGTCTACCCTTCGAATTCCATCCAGTGGAAGGCAAAATCGGGAACATAACAAACCCGGGTCAACTGGAATTGAGATCCGGGGAAGCAGTAGTAGTTCATTGGATGCATCATTGCTTATACGACGTAACGGGAAGCGATATAGGTACGCTTCGATTACTTTCAAATCTAAAACCAAAACTAATCACCATTGTTGAACAAGATCTGAGCCATGGAGGTAGTTTTTTAGGAAGATTTGTAGAAGCTTTACATTATTATAGCGCGTTATTTGACGCGCTTGGTGATAGTTTAGGGATGGATAGTGTTGAGAGACATGTGGTGGAACAGCAATTGTTTGGGTGTGAGATTAGGAACATTATCGCCGTTGGTGGACCCAAAAGAACTGGTGAAGTGAAGGTGGAAAGATGGGGAGATGAACTCAAGCGGGTCGGCTTTAAACCCCTTTCTCTTCGTGGAAACCCGGCTGCTCAAGCCAGTTTACTTCTAGGAATGTTCCCATGGAAAGGCTATACTCTTGTTGAAGAAAATGGGTGCCTCAAACTTGGATGGAAGGATTTATCTCTTCTTACCGCCTCAGCATGGCAGCCCGCATAA 738 45.66 MQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRRLADFATSLGLPFEFHPVEGKIGNITNPGQLELRSGEAVVVHWMHHCLYDVTGSDIGTLRLLSNLKPKLITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLGMDSVERHVVEQQLFGCEIRNIIAVGGPKRTGEVKVERWGDELKRVGFKPLSLRGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPA 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20331690 20333311 + MELO3C016202.2.1 Cme07g01458 333474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01458 245 Pfam GRAS domain family 1 243 IPR005202 -
Cme07g01458 245 ProSiteProfiles GRAS family profile. 1 243 IPR005202 -
Cme07g01458 245 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 243 IPR005202 -
Cme07g01458 245 PANTHER SCARECROW-LIKE PROTEIN 23 1 243 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01458 Cme-Chr7:20331690 Cme08g02035 Cme-Chr8:25642962 1.68E-108 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41652 PF03514 GRAS 1.20E-71 CL0063 Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01458 - - csv:101212169 493.041