Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01477 ATGTACGTCTTCCTCTCCCTCGTTGCCTTCTTCTTCCTTCTTTTCTTTCGTTATCTTTTCAAATTCTCTGCTCCGGCTACCCGGAAACTTCCCCTTCCCCCGGGTTCCATGGGTTGGCCCTATTTGGGTGAGACCCTCCAGCTCTACTCTCAAGATCCCAATGTCTTCTTTGCTTCAAAAAAGAAGAGATATGGTCCAATTTTTAAGTCGCATATATTGGGGTATCCTTGCGTGATGCTTTCTAGTCCTGAAGCTGTTAAGTTTGTATTGGTGACTAAAGCTCATCTCTTTAAGCCTACATTTCCAGCTAGTAAAGAGAGGATGTTGGGAAAAAATGCTATCTTTTTTCATCAAGGTGATTACCATGCCAAATTGAGACGTCTTGTTCTTCGAACTTTCATGCCTGAGGCGATTCGAAACATCGTCCCGAGTATCGAATCCATTGCTAAAAACACCGTTCAATCATGGGATGGACAATTGATTAACACCTTTCAAGAAATGAAGATGTTCGCATTCGAGGTTTCGTTGCTTTCGATATTCGGAAAAGACGAAGCTCTTTATTTCGAAGACCTCAAGCGATGCTACTACATTCTTGAAAATGGCTACAATTCGATGCCGATTAACCTCCCCGGAACACTCTTCCACAAGGCCATGAAAGCAAGGAAAGAGCTAGCACAAATACTAAACAAAATCCTCTCAACAAGAAGGGAAATGAAGCGCGACTACGACGACCTCCTTGGATCTTTCATGGGCGAAAAAGAAGGCCTCACCGACACACAAATCGCCGATAACGTCATCGGTCTCATCTTCGCTGCTCGCGACACCACCGCGAGTGTCCTAACATGGATCTTAAAATACCTAGGAGAAAACCCAAGTATTCTTCAAGCTGTAACAGCTGAACAAGAATCAATAATGAAATCAAAAGAAAATGGAGAAGATAATCTCACATGGGCTGACACCAAAAATATGCCAATAACTTCAAGAGTAATTCAAGAAACTCTAAGAGTGGCTTCAGTTTTATCATTTACTTTTAGAGAAGCAGTGGAAGATGTTGAATTTGATGGATACTTAATTCCAAAAGGATGGAAAGTTTTACCTTTGTTCAGAAACATTCATCACAGCCCAGAAATTTTCCCTCAACCTGAAAAATTTGATCCTTCAAGATTTGAGGTTTCACAGAAGCCCAATACATACATGCCATTTGGCAATGGGACCCACTCATGTCCAGGAAATGAATTAGCCAAGCTGGAAATGTTGGTTCTACTCCATCATTTAACCACAAAGTATAGGTGGAATGTAGTTGGTGAACAAGAAGGGATTCAATATGGTCCTTTTGCACTTCCTCTCAATGGCCTTCCTATTAGAATCTCTCTCAAGAAGTAA 1383 41.5 MYVFLSLVAFFFLLFFRYLFKFSAPATRKLPLPPGSMGWPYLGETLQLYSQDPNVFFASKKKRYGPIFKSHILGYPCVMLSSPEAVKFVLVTKAHLFKPTFPASKERMLGKNAIFFHQGDYHAKLRRLVLRTFMPEAIRNIVPSIESIAKNTVQSWDGQLINTFQEMKMFAFEVSLLSIFGKDEALYFEDLKRCYYILENGYNSMPINLPGTLFHKAMKARKELAQILNKILSTRREMKRDYDDLLGSFMGEKEGLTDTQIADNVIGLIFAARDTTASVLTWILKYLGENPSILQAVTAEQESIMKSKENGEDNLTWADTKNMPITSRVIQETLRVASVLSFTFREAVEDVEFDGYLIPKGWKVLPLFRNIHHSPEIFPQPEKFDPSRFEVSQKPNTYMPFGNGTHSCPGNELAKLEMLVLLHHLTTKYRWNVVGEQEGIQYGPFALPLNGLPIRISLKK 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20551212 20553518 - MELO3C016219.2.1 Cme07g01477 333493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01477 460 SUPERFAMILY Cytochrome P450 28 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01477 460 PANTHER CYTOCHROME P450 26 10 457 - -
Cme07g01477 460 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01477 460 PRINTS E-class P450 group I signature 260 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01477 460 PRINTS E-class P450 group I signature 280 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01477 460 PRINTS E-class P450 group I signature 327 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01477 460 PRINTS E-class P450 group I signature 367 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01477 460 PRINTS E-class P450 group I signature 398 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01477 460 PRINTS E-class P450 group I signature 408 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01477 460 PANTHER ABSCISIC ACID 8'-HYDROXYLASE CYP707A2 10 457 - -
Cme07g01477 460 Pfam Cytochrome P450 33 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01477 460 PRINTS P450 superfamily signature 271 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01477 460 PRINTS P450 superfamily signature 328 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01477 460 PRINTS P450 superfamily signature 399 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01477 460 PRINTS P450 superfamily signature 408 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01477 460 Coils Coil 217 237 - -
Cme07g01477 460 Gene3D Cytochrome P450 23 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01477 460 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 401 410 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00047 Cme-Chr1:374836 Cme07g01477 Cme-Chr7:20551212 0 dispersed
Cme03g02046 Cme-Chr3:27961732 Cme07g01477 Cme-Chr7:20551212 6.54E-127 dispersed
Cme07g01477 Cme-Chr7:20551212 Cme12g00155 Cme-Chr12:1530762 8.96E-160 dispersed
Cme07g01477 Cme-Chr7:20551212 Cme07g00357 Cme-Chr7:2295995 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01477 K09843 - csv:101212508 891.723