Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme07g01613 | ATGGGTGATGACAATATTAATCAAATGGGAACTACTAGTTCATCGTCAATGATGAATAATTGTGAGATTATTGATTGGGATGGGCTATTTTCTAGTTCTTGTTTGAGTAATAACAATTTGGAGATGGTAGAGAAGGGAATTTGTGGAAGTGAGGATGATAATAATTATTATCCAATGGGAGATAGTAATTATGATAATAATAATAATGTTGTTATTGGAGGAGTAAAAGAGGGTGATATTGTTATTAGTGGAGGGAATAATCATAATAACAACAATAATATTAAGTATAAAGGGAGAATGGTGATGGGTAAAAGAAGAAGTGCAATGGCTTCTCCAAGAATTGCTTTTCAAACAAGAAGTGTTGAGGATGTTCTTGATGATGGCTATAGATGGAGGAAATATGGTCAGAAGGCTGTCAAACATAGCAACCATCCTAGGAGCTATTACAGGTGTACACATCACACATGCAATGTTAAGAAACAAATTCAAAGGCATTCAAAGGATCCAACAATAGTTGTTACAACATATGAAGGGATTCACAATCATCCATCTGAGAAATTAATGGAAACTCTAACCCCTCTTCTCAAGCAATTGCAATTCCTTTCAGGCATTTAG | 615 | 34.47 | MGDDNINQMGTTSSSSMMNNCEIIDWDGLFSSSCLSNNNLEMVEKGICGSEDDNNYYPMGDSNYDNNNNVVIGGVKEGDIVISGGNNHNNNNNIKYKGRMVMGKRRSAMASPRIAFQTRSVEDVLDDGYRWRKYGQKAVKHSNHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLSGI | 204 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 21921994 | 21924242 | - | MELO3C016337.2.1 | Cme07g01613 | 333629 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme07g01613 | 204 | Gene3D | WRKY domain | 110 | 184 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cme07g01613 | 204 | SUPERFAMILY | WRKY DNA-binding domain | 119 | 184 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cme07g01613 | 204 | SMART | WRKY_cls | 125 | 184 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cme07g01613 | 204 | PANTHER | WRKY TRANSCRIPTION FACTOR 43-RELATED | 15 | 200 | - | - | |
Cme07g01613 | 204 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 15 | 200 | IPR044810 | GO:0003700 | |
Cme07g01613 | 204 | Pfam | WRKY DNA -binding domain | 126 | 183 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cme07g01613 | 204 | ProSiteProfiles | WRKY domain profile. | 120 | 185 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme07g01613 | Cme-Chr7:21921994 | Cme08g00164 | Cme-Chr8:1148798 | 2.90E-31 | dispersed | |
Cme06g01105 | Cme-Chr6:8334020 | Cme07g01613 | Cme-Chr7:21921994 | 5.69E-18 | transposed | |
Cme06g01785 | Cme-Chr6:20817270 | Cme07g01613 | Cme-Chr7:21921994 | 9.18E-38 | transposed | |
Cme07g01915 | Cme-Chr7:24377154 | Cme07g01613 | Cme-Chr7:21921994 | 2.43E-21 | transposed | |
Cme06g00148 | Cme-Chr6:896741 | Cme07g01613 | Cme-Chr7:21921994 | 1.53E-47 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
41664 | PF03106 | WRKY | 8.50E-25 | CL0274 | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme07g01613 | - | - | cmo:103493140 | 392.504 |