Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01677 ATGGCTACGTTTGTGGAGCCACCGAACGGAATCAGATCGATGGGAAAGCATTACTATACAATGTGGCAAACTCTGTTTGAAGTTGATACTAAATATGTCCCAATCAAGCCGATTGGGCGAGGTGCTTATGGTGTTGTGTGTTCTTCGATTAACCGAGAGACTAACGAGAAAGTGGCGATCAAGAAAATTCATAATGTGTTTGAGAATCGTACGGACGCCATGAGAACACTGAGAGAGCTGAAGCTTTTGAGGCATATACGGCATGAGAATGTGATTGCTTTGAAGGATGTGATGATGCCAATTCATAGGAAAAACTTTAAAGATGTTTATTTGGTTTATGAACTCATGGATACAGATCTTCATCAGATTATCAAGTCCCCTCAGCCACTCTCCCATGATCATTGCAAGTACTTTATCTATCAGTTGCTTTGCGGGTTGCAGCATCTTCATTCAGCTAACATTCTTCACCGGGACTTGAAGCCCGGGAACCTCCTTGTCAATGCTAACTGTGATCTTAAGATATGCGATTTTGGGTTAGCACGAACTAGCATGGGCCATGATCAGTTCATGACTGAGTATGTTGTTACTCGCTGGTATCGGGCTCCAGAACTTCTTCTCTGCTGTGACAACTATGGGACTTCCATTGATGTATGGTCTGTGGGATGCATCTTTGCTGAGATTCTTGGTCGGCAACCTATCTTCCCAGGGACGGAGTGCCTCAACCAACTTAACTTAATCATCACCATTCTCGGTAGTCCGAAGGAAGCAGATGTTCAGTTCATTGACAATGTAAAGGCCAGAAATTATATCAAGTCATTGCCCTTCTCAAGAGGAATACGCCTTTCGCATCTTTATCCACAAGCTGAACCTTTAGCTATAGACTTGTTACAGAAGATGCTTGTGTTTGATCCAACTAAGAGAATTACCGTTGACGAAGCACTTCAACATCCATACATGTCGGGGCTATACGACCCGAAATTCAATTCTCCTGTTGAGGTTCCTCTCAATCTCGACATCGACGACTCACTTGGGGAGCCTAAGATCAGGGAAATGATGTTGAATGAGATGCTGTATTACCATCCTGAAGCTGTTGAAGCTGTTTCTACATTTTCTTAA 1116 43.19 MATFVEPPNGIRSMGKHYYTMWQTLFEVDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIHNVFENRTDAMRTLRELKLLRHIRHENVIALKDVMMPIHRKNFKDVYLVYELMDTDLHQIIKSPQPLSHDHCKYFIYQLLCGLQHLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSMGHDQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRQPIFPGTECLNQLNLIITILGSPKEADVQFIDNVKARNYIKSLPFSRGIRLSHLYPQAEPLAIDLLQKMLVFDPTKRITVDEALQHPYMSGLYDPKFNSPVEVPLNLDIDDSLGEPKIREMMLNEMLYYHPEAVEAVSTFS 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22367188 22369659 + MELO3C016399.2.1 Cme07g01677 333693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01677 371 Gene3D Phosphorylase Kinase; domain 1 19 115 - -
Cme07g01677 371 Gene3D Transferase(Phosphotransferase) domain 1 116 340 - -
Cme07g01677 371 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g01677 371 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cme07g01677 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 364 - -
Cme07g01677 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Cme07g01677 371 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g01677 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 364 - -
Cme07g01677 371 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Cme07g01677 371 SUPERFAMILY Protein kinase-like (PK-like) 24 325 IPR011009 -
Cme07g01677 371 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01929 Cme-Chr3:27348204 Cme07g01677 Cme-Chr7:22367188 0 dispersed
Cme07g01677 Cme-Chr7:22367188 Cme11g02185 Cme-Chr11:29178118 3.07E-145 dispersed
Cme07g01677 Cme-Chr7:22367188 Cme09g01791 Cme-Chr9:22327506 7.84E-146 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65027 PF00069 Pkinase 1.90E-71 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01677 K20537 - csv:101203896 741.88