Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01686 ATGGCTCAATCTAAGAGCTTGGTTGTTGTATTTGCTTTTCTTGCCTTGGCTTCGGTTGCTTTCTCTCACAAGATTGGTGGCCATGGCGGCCATGGTGGCAATGGCGGAGGCGGATACTATTTGTATCCTCAATTTTATGATCATTCATGTCCAAGAGCTCAAGAGATAGTGAAGTCTATAGTGGCTAAGGCTTTTGCAAAGGAAGCTCGTATTGCTGCTTCCTTGCTTAGGCTTCATTTCCATGATTGTTTTGTTAAGGGTTGTGATGGTTCAATATTGTTAGATAGCAGTGGGACAATAGCTAGTGAGAAAAGATCAAATCCAAACAGAAACTCTGCTAGAGGATTTGAAGTGATTGATGAGATCAAATCTGCTTTGGAGAAAGAATGTCCTCAAACTGTTTCTTGTGCTGATATTTTGGCCATTGCTGCCAGAGACTCCACTGTCATTACTGGAGGACCAAGTTGGGAAGTTCCACTAGGAAGAAGGGATTCAAGAGGAGCAAGTCTAAGTGGCTCTAATAATGACATTCCTGCTCCTAACAACACTTTCCAAACCATTCTCACCAAGTTCAAGAGACAAGGCCTTGATATTGTTGATCTTGTTGCTCTTTCAGGTAGTCACACCATCGGAAACTCCCGATGCACTAGCTTCAGACAACGTCTTTACAACCAATCCGGCAACGCCCAGCCTGATCCCTCTCTCGATCCATCATATGCTGCCGAGTTGCGGAAGCGATGCCCGAGATCAGGTGGTGACCAGAACCTGTTCTTCCTGGACTTCGTGAGCCCCACCAAGTTTGACAACTACTACTTCAAGAATATTTTAGCTGCAAAGGGTCTGCTGAACTCAGATGAAGTTCTGTTGACAAAGAACTTGCAATCAGCAGAATTGGTGAGAGCATATGCAGAGAATTCTGAGTTGTTTTTTGAGCAATTTGCAAAGTCTATGGTGAAGATGGGAAACATTTCTCCTCTAACTGGCTCAAGAGGAGAGATCAGAAAGAACTGCAGGAAAGTTAATAGAGATTAG 1032 43.8 MAQSKSLVVVFAFLALASVAFSHKIGGHGGHGGNGGGGYYLYPQFYDHSCPRAQEIVKSIVAKAFAKEARIAASLLRLHFHDCFVKGCDGSILLDSSGTIASEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILAIAARDSTVITGGPSWEVPLGRRDSRGASLSGSNNDIPAPNNTFQTILTKFKRQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQSGNAQPDPSLDPSYAAELRKRCPRSGGDQNLFFLDFVSPTKFDNYYFKNILAAKGLLNSDEVLLTKNLQSAELVRAYAENSELFFEQFAKSMVKMGNISPLTGSRGEIRKNCRKVNRD 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22396550 22399035 + MELO3C016405.2.1 Cme07g01686 333702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01686 343 Gene3D - 45 341 - -
Cme07g01686 343 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Cme07g01686 343 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 PRINTS Plant peroxidase signature 114 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 PRINTS Plant peroxidase signature 199 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 PRINTS Plant peroxidase signature 258 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 PRINTS Plant peroxidase signature 274 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 PRINTS Plant peroxidase signature 315 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 ProSiteProfiles Plant heme peroxidase family profile. 40 341 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 200 210 IPR019793 -
Cme07g01686 343 Pfam Peroxidase 57 305 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 PRINTS Haem peroxidase superfamily signature 260 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 PANTHER PEROXIDASE 72-RELATED 6 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 SUPERFAMILY Heme-dependent peroxidases 41 341 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme07g01686 343 CDD secretory_peroxidase 41 340 IPR033905 GO:0004601|GO:0042744
Cme07g01686 343 PANTHER PEROXIDASE 6 341 - -
Cme07g01686 343 Gene3D Peroxidase, domain 2 178 321 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00072 Cme-Chr4:537111 Cme07g01686 Cme-Chr7:22396550 3.63E-112 dispersed
Cme04g02541 Cme-Chr4:31630075 Cme07g01686 Cme-Chr7:22396550 1.68E-70 dispersed
Cme07g01686 Cme-Chr7:22396550 Cme03g01035 Cme-Chr3:19575862 4.21E-113 dispersed
Cme07g01772 Cme-Chr7:23269540 Cme07g01686 Cme-Chr7:22396550 2.38E-72 dispersed
Cme11g00509 Cme-Chr11:5199458 Cme07g01686 Cme-Chr7:22396550 9.24E-97 dispersed
Cme11g02047 Cme-Chr11:28240971 Cme07g01686 Cme-Chr7:22396550 5.96E-73 dispersed
Cme11g02091 Cme-Chr11:28567048 Cme07g01686 Cme-Chr7:22396550 9.71E-102 dispersed
Cme12g01555 Cme-Chr12:22973936 Cme07g01686 Cme-Chr7:22396550 2.29E-86 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01686 K00430 - csv:101223204 624.009