Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01696 ATGGATTTCGTTTTGCAGAGTTTTCCGATTTCAACATTTTTGTTCTTCATTCTGCCTCTTGTGTTCCTTCTTCATGCTTCCATTTTCCGGCGACCACGACGACCGCCACTTCCTCCGGGGCCTAAAGGGTTACCCCTCCTCGGCAATATGCTGTTGAGACACCAACTCACCCACCGTGGACTCGCCGCCTTGGCCAAACGGTATGGCGGAATCTTCCACCTCCGCATTGGCTTCGTCCACATGGTCGTCATTTCCGACCCTGACGCTGCTCGGAATGTGCTTCAGGTGCAAGATCTAGTGTTTTCAAACCGTCCAGCAACCAACGCTATCAAATACTTAACATACGATCGAGCCGACATGGCATTTGCTCACTATGGCCCTTTTTGGCGACAAATGCGAAAACTATGCGTTATGAAATTATTTAGCCGGAAGCGAGCTGAGTCGTGGACATCTGTTCGACATGAGGTTGATAATCTAATCACCACAATCGCCAACAACACACAAACCCCTTTCAACCTCGGCCACCTAGTCTTTTCAATGACCATGAACATCATTTATCGCGCAGCCTTTGGGACCTCCCAACCACGAGACCAAGCCCAATTCATCAAAATACTTGAAGAATTCTCAAAACTTTTTGGAGCTTTCAATGTCGCTGATTTCTTCCCTTGTCTTGGTTGGATTGATCCTCAAGGTATCACTAGTAGATTGGTGGAGGCTCGTAGATCGCTCGATCGATTCATTGATAGAATCATTGACCAACATTTGGTAGAAAGGAAGGAAAGGGATCAGGAAATTGACAAGGACATGGTTGATGAGTTACTAGCTTTTTATAGTGAAGATGAGGGAGGAAATAATGAAACTGACTTAGAGGATTTGCATTTGCAAACTACAATCAAACTCACTAGAGACAATATCAAAGCCATCATCATGGATGTAATGTTTGGCGGCACAGAAACCGTGGCCTCCGCCATTGAATGGACCATGGCCGAGCTCATGAGAAACCCCGACGACCTCAAAAAGCTTCAACAACAACTCGACGCCACTGTCGGCCTTCACCACCGTCCACAAGAATCCGACTTACACAATCTAACATACCTCAGATGCATTCTCAAAGAAACTCTCCGCCTCCACCCGCCGATCCCACTCCTCCTCCACGAGACGGCGGCCGACACCAAACTTGCCGGCTATCGGATCCCTGCCAAGTCTCGTGTCTTCATCAACGCATGGGCGATCGGTCGGGACGAGAAGTCGTGGGTGGACCCCGATATTTTCCGGCCGGCGAGGTTTGAAATGGAAGGTGCCGCTGATTTTAAAGGTGGGGACTTTGAGTTTATTCCGTTCGGGTCAGGGCGGAGGTCTTGCCCTGGAATGCAGCTGGGGATTTATGCAGTGGAGATGGCGGTGGCGAATTTGGTACATTGTTTTGAGTGGAAGTTGCCGGAGGGGATGAAGCCAGCCGAGTTGGATATGAATGACGTTTTTGGACTCACTGCACCTAGAGCGAGTCGACTTGTTGCTGTTCCCTACCAGAGAGTTGTTTGA 1542 48.96 MDFVLQSFPISTFLFFILPLVFLLHASIFRRPRRPPLPPGPKGLPLLGNMLLRHQLTHRGLAALAKRYGGIFHLRIGFVHMVVISDPDAARNVLQVQDLVFSNRPATNAIKYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWTSVRHEVDNLITTIANNTQTPFNLGHLVFSMTMNIIYRAAFGTSQPRDQAQFIKILEEFSKLFGAFNVADFFPCLGWIDPQGITSRLVEARRSLDRFIDRIIDQHLVERKERDQEIDKDMVDELLAFYSEDEGGNNETDLEDLHLQTTIKLTRDNIKAIIMDVMFGGTETVASAIEWTMAELMRNPDDLKKLQQQLDATVGLHHRPQESDLHNLTYLRCILKETLRLHPPIPLLLHETAADTKLAGYRIPAKSRVFINAWAIGRDEKSWVDPDIFRPARFEMEGAADFKGGDFEFIPFGSGRRSCPGMQLGIYAVEMAVANLVHCFEWKLPEGMKPAELDMNDVFGLTAPRASRLVAVPYQRVV 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22519046 22522025 - MELO3C017540.2.1 Cme07g01696 333712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01696 513 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01696 513 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01696 513 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01696 513 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01696 513 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01696 513 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01696 513 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01696 513 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01696 513 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01696 513 PANTHER CYTOCHROME P450 84A1-RELATED 1 512 - -
Cme07g01696 513 SUPERFAMILY Cytochrome P450 38 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01696 513 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01696 513 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01696 513 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01696 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Cme07g01696 513 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 1 512 - -
Cme07g01696 513 Gene3D Cytochrome P450 30 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01696 513 Pfam Cytochrome P450 38 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01696 Cme-Chr7:22519046 Cme08g00809 Cme-Chr8:5370456 3.28E-133 dispersed
Cme01g01350 Cme-Chr1:16873453 Cme07g01696 Cme-Chr7:22519046 0 transposed
Cme07g01696 Cme-Chr7:22519046 Cme08g00907 Cme-Chr8:5961591 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01696 K09755 - mnt:21409371 683.715