Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme07g01703 | ATGCTGACAGACTTAGAAAATTCAACCGAAGTCAGTATCTCCTCCTCCGGAAATCAACTTCCGCCGCCCAAATCCGCCGTGAAAAAAAAGCGTAGTTTACCTGGAATGCCAGATCCGGATGCGGAGGTAATTGCTCTGTCTCCGAAGACTCTTTTGGCTACAAATCGATTTGTGTGTGAAATTTGCAACAAAGGGTTTCAAAGAGATCAGAATCTTCAACTTCACCGACGAGGTCATAATCTTCCATGGAAACTCCGGCAACGGACAAGCAAAGAGGTGAAAAAGAAAGTCTATGTCTGCCCGGAACCGTCATGCGTCCACCACCATCCGTCGAGAGCTCTCGGCGATCTGACTGGAATAAAGAAGCACTTCTGCCGGAAGCACGGCGAGAAGAAATGGAAGTGTGAAAAGTGCTCTAAAAAATACGCCGTCAAGTCCGATTGGAAGGCCCATTCTAAGATTTGTGGAACCAGAGAGTACAAGTGCGACTGTGAGACTGTGTTTTCGAGAAGAGATAGTTTCATCACTCACAGAGCGTTCTGTGATGTGTTGACGAAGGAAGTTGCCGGAAGTTTGTCTCCGGCAGCGGCGGAGATTCCTAATTTGGAGTCCGATCCTCAAGTTCAGCGACCGTCGGGTAGTTCGTCTCCGCCGCCTTCTGCTCCTCCTCTTCCCGCCGGTACCGCTCCCGTCCCACTAGCCCTCCCTCCATCCACTGACACGATATCATCAATCGCGTCCATTGAGAATAAAGCCTCACCGGAAAATCCTCCGCCGCCGCTTGGAGAGGCACAAGACAGAACGAGCCTAACTGGAAACTCCGGCAGCAGCAACACCACAATCAGCAGCACCAATGCTACCGTATTGGCTAGCTTGTTTGCTTCCTCTGCCGCATCACTGAGCTTACAGCCGCCGCAGCCGCCAGCATTTTGCGACTTATTACGAGCCATGGCGCGGCCCGATCGAGCGACTGAAATTGCACCGCCTTTGGTTTTTGAACCTCTTTCTCTGTGCCTATCGACCGACACTGATTCGTCCCTTTTCAGAGCCGGAATCCAAGATTGCCGCCCGTATGTCCCACCGACGCCGCCGGCCATGTCCGCCACCGGACTCCTACAGAAGGCCGCTCAAATGGGCGCTGCGGCGGCGGGCGCATCAGTGTTTCGTGGACTTGGTTTATCGTCCTCCCCTTCTTCTGCACAACAGGGGAGTTTATAA | 1218 | 52.71 | MLTDLENSTEVSISSSGNQLPPPKSAVKKKRSLPGMPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEVKKKVYVCPEPSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVKSDWKAHSKICGTREYKCDCETVFSRRDSFITHRAFCDVLTKEVAGSLSPAAAEIPNLESDPQVQRPSGSSSPPPSAPPLPAGTAPVPLALPPSTDTISSIASIENKASPENPPPPLGEAQDRTSLTGNSGSSNTTISSTNATVLASLFASSAASLSLQPPQPPAFCDLLRAMARPDRATEIAPPLVFEPLSLCLSTDTDSSLFRAGIQDCRPYVPPTPPAMSATGLLQKAAQMGAAAAGASVFRGLGLSSSPSSAQQGSL | 405 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 22570601 | 22573890 | + | MELO3C017545.2.1 | Cme07g01703 | 333719 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme07g01703 | 405 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
Cme07g01703 | 405 | Pfam | Zinc finger, C2H2 type | 57 | 79 | IPR013087 | - | |
Cme07g01703 | 405 | MobiDBLite | consensus disorder prediction | 212 | 232 | - | - | |
Cme07g01703 | 405 | Gene3D | Classic Zinc Finger | 37 | 104 | - | - | |
Cme07g01703 | 405 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 4 | 400 | - | - | |
Cme07g01703 | 405 | SMART | c2h2final6 | 57 | 79 | IPR013087 | - | |
Cme07g01703 | 405 | SMART | c2h2final6 | 133 | 153 | IPR013087 | - | |
Cme07g01703 | 405 | PANTHER | PROTEIN INDETERMINATE-DOMAIN 2-LIKE | 4 | 400 | - | - | |
Cme07g01703 | 405 | MobiDBLite | consensus disorder prediction | 196 | 279 | - | - | |
Cme07g01703 | 405 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cme07g01703 | 405 | SUPERFAMILY | beta-beta-alpha zinc fingers | 56 | 153 | IPR036236 | - | |
Cme07g01703 | 405 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 57 | 79 | IPR013087 | - | |
Cme07g01703 | 405 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 59 | 79 | IPR013087 | - | |
Cme07g01703 | 405 | Gene3D | Classic Zinc Finger | 126 | 186 | - | - | |
Cme07g01703 | 405 | MobiDBLite | consensus disorder prediction | 237 | 251 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme03g01971 | Cme-Chr3:27590275 | Cme07g01703 | Cme-Chr7:22570601 | 1.95E-113 | dispersed | |
Cme07g01703 | Cme-Chr7:22570601 | Cme11g00875 | Cme-Chr11:11738322 | 4.85E-112 | dispersed | |
Cme07g01703 | Cme-Chr7:22570601 | Cme08g00831 | Cme-Chr8:5504754 | 3.92E-159 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
41676 | PF00096 | zf-C2H2 | 0.0039 | CL0361 | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme07g01703 | K25869 | - | csv:101215476 | 672.544 |