Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01717 ATGTTCCACACAGAGCTTTTACTCTGTTTTCTCCCTTCTATTTTAGCTCTCTTCCTCTTCCTCATTCTCCTCAAACGAAAGAGAAATGCCGTCCATCTTGATCTCCCCCCCGGCAGTATGGGTTGGCCGTTTCTTGGCGAGACCATCGGTTATCTCCGGCCCTATTCCGCTACCACCATCGGAGCTTTCATGGAGAATCACATCAGGAGATATGGTAAAGTGTATAAGTCGAACTTGTTCGGAGAGCCGACGGTGGTGTCGGCCGATGCCGGACTGAATCGATATATTCTGCAAAACGAAGGGCGGTTGTTTGAATGTAGCTATCCGCGGAGTATCGGTGGGATCCTAGGGAAATGGTCGATGCTGGTTACCGTCGGCGACATGCACCGGGATATGAGAATGATATCCTTGAATTTTCTCTGTCAGAGTAGGCTTAAGAATAATCTGTTGAAGGAAGTTGAGAACCAGACGCTTCTTGTTCTTCGTTCTTGGAAAGATTCTTCCACGTTTTTGGCGCAGGACGAAGCCAAAAAGTTCACTTTTAATTTAATGGCGAAACATATCATGAGTTTGGATCCATGGAAGTTGGAAACAGAGATGTTGAAGAAGGAGTATGTGACTTTCATGAAAGGAGTGATTTCTCCGCCGCTGAATCTTCCCGGAACGCCGTACAGACGAGCTCTTAAGTCTCGGTCGACGATCTTGAAGTTCATCGAACGGAAAATGGAGGAACGGAAGTTTAAAATGGAAGCCGACGGCGGTGAGTTCCAGGATGATGATCTACTCGGTTGGGCATTGAAGCACTCAAATCTCTCAACGGAGCAAATCCTCGACCTAATTCTTAGTTTGCTGTTCGCCGGCCACGAAACTTCTTCAGTCGCCATAGCTTTAGCCATCTTCTTCCTCTCCGGCAGTCCAGCTGCCGTTCAACAGTTGACAGAAGAACACCTGGAAATCGCCAGAGGCAAAAAGCGATTGGGAAAAACAGATTTGGATTGGGAAGATTACAAGAAAATGGAATTCACGCAAAGTGTGATTAACGAAACGCTTCGTCTTGGAAACGTCGTGAGATTTCTTCATAGAAAGGCACTGAAGGATGTACGGTACAGAGGTTATTTCATTCCACGTGGATGGAAAGTGCTTCCTGTGATTTCTTCAGCTCATTTGGATCCTCTAGTTTTTGACCAACCTCATCACTTTAATCCATGGAGATGGCAGCAAATGAATGGATCGTCATTGGGTATCCCGAGCACGACAATAACCAATAATTTCATGCCGTTTGGCGGAGGACCGCGATTATGTACTGGCTCAGAACTAGCAAAGCTTGAAATGGCCATTTTTATCCATCACTTGGTTTTGAACTACCAATGGGAATTGGTAGGTTCAGATCAAGCTTTTGCTTACCCTTTTGTTGATTTCCCTAAAGGTCTACCAATCAGAGTCCGCCATCGCACACTCGTGTAA 1464 45.97 MFHTELLLCFLPSILALFLFLILLKRKRNAVHLDLPPGSMGWPFLGETIGYLRPYSATTIGAFMENHIRRYGKVYKSNLFGEPTVVSADAGLNRYILQNEGRLFECSYPRSIGGILGKWSMLVTVGDMHRDMRMISLNFLCQSRLKNNLLKEVENQTLLVLRSWKDSSTFLAQDEAKKFTFNLMAKHIMSLDPWKLETEMLKKEYVTFMKGVISPPLNLPGTPYRRALKSRSTILKFIERKMEERKFKMEADGGEFQDDDLLGWALKHSNLSTEQILDLILSLLFAGHETSSVAIALAIFFLSGSPAAVQQLTEEHLEIARGKKRLGKTDLDWEDYKKMEFTQSVINETLRLGNVVRFLHRKALKDVRYRGYFIPRGWKVLPVISSAHLDPLVFDQPHHFNPWRWQQMNGSSLGIPSTTITNNFMPFGGGPRLCTGSELAKLEMAIFIHHLVLNYQWELVGSDQAFAYPFVDFPKGLPIRVRHRTLV 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22681208 22686094 - MELO3C017559.2.1 Cme07g01717 333733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01717 487 SUPERFAMILY Cytochrome P450 31 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01717 487 Gene3D Cytochrome P450 24 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01717 487 PANTHER CYTOCHROME P450 26 15 461 - -
Cme07g01717 487 PANTHER CYTOCHROME P450 90B1 15 461 - -
Cme07g01717 487 Pfam Cytochrome P450 36 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01717 487 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01717 487 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01717 487 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01717 487 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01717 487 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01717 487 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01717 487 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01717 487 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01717 487 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g01717 487 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01717 Cme-Chr7:22681208 Cme10g01069 Cme-Chr10:9321685 4.42E-117 dispersed
Cme09g00445 Cme-Chr9:4267410 Cme07g01717 Cme-Chr7:22681208 2.19E-77 dispersed
Cme11g02128 Cme-Chr11:28834677 Cme07g01717 Cme-Chr7:22681208 7.28E-79 dispersed
Cme07g01717 Cme-Chr7:22681208 Cme01g02852 Cme-Chr1:35383310 2.78E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01717 K09587 - csv:101211854 948.732