Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01720 ATGGCGTATATGTGCGCAGACAGTGGTAATCTAATGGCTATTGCTCAACAACTCATCAACCAAAAACAACAGCAAGACCAACAGCAACACCATCTTTCTCCACTTTCCCCTTTTTCTATTCTTCCTTGGACTAATAACATCAATCCTTCCTCAACTATGGCTTCTTCTTCTTCTTCTTCTCCTAACTTCTCTTTTGGGATTTCTTCCTCTTCCTTCTCTGACCCTTTTCATGTCGCCGCACCTCCTGATTCCTCCGACCCTTCTTTTCATTTCCCTAATTTGGACCACCCTTCTGCCGGATTTCGATTCTTCCCTAATTTTAGTGGCGCTGGTGGAGAGTTTGAATCTGATGAGTGGATGGATAGTTTAGTCGGTGGTGGAGATTCCACGGATAGCTCCACTTTGCCGTCTGGTTGTGAAGGTTATGGTGAGTTTGGTCTTTATGGTGCAGATCCGTTTGATGGCTCTCCGCCGTCAGTTGTTGTCTTGGAAAACTCGTACAAGATTAATAGTGTTCCGCCTCCATGGCCGTCATGTCCTCCATTGGTGAAGGAGGAGAGAGTAACGAATCCACCGGCGGAGAGGCCGTTGAAGAATGATGTTGTTGAAGGCTCATCGAGTGCATTAGAAGTGGAGTCATCGTCGCCGGTTCTGAAAGTGTTGCTTGATTGTGCGCGGCTGTGTGATTCTGAGCCTAACCGTGCAGCGAAAACTCTTAATCGGATTAGTAAATCGTTACGAGAGGATGGAGATCCGATTGAGCGAGTGGGGTTTTACTTTGGTGAGGCTCTTCGGAAGAGATTGTCCTTGACGGCGATGAAGAATTGCTTGGATTCAACTGAGAGCGATGCTAATTCTGAAGATTTCTTGCTCTCATACAAAGCTCTTAACGATGCCTGTCCTTACTCCAAGTTCGCCCATCTCACGGCCAACCAAGCAATTCTGGAAGTTACACAGAGAGCAAGTAAAATTCACATTGTCGACTTCGGAATCGTTCAAGGTGTCCAATGGGCGGCCCTTCTGCAGGCTTTGGCAACGCGCGCCACCGGAAAACCTGTCAGGGTTCGTATCTCCGGAATACCAGCGCCGTCGCTCGGAGACTCACCGGCAGCGTCTCTATACGCCACTGGTAACAGACTCTCCGAGTTCGCAAAGATTCTGGAATTGAATTTCGAGTTCCAACCGATTCTAACGCCGATTGAAAACCTGAAGGAATCGAGCTTCAGCGTTCAATCAGACGAGGTATTGGCCGTGAATTTCATGCTTCAATTGTACAATCTCCTGGATGAGAATTCAACCGGAGTTCATAATGCTCTCCGATTAGCAAAATCGTTGAGTCCTCAAATAGTGACTCTCGGTGAGTATGAAGCGAGTTTGAACCGGAACGGATTCTACAGTCGTTTCAAGAACGCTCTCAAATTCTACTCCTCCATTTTCGAATCGCTAGAGCCGAACTTGCCTCGAGACTCACCAGAAAGACTTCAATTAGAAAAACTATTACTCGGCCGTCGAATCGCCGGCGTGGTTGGAACCGTAGAAGATTCAAGACGCGAAAGAAGAGTACGCATGGAAGATAAAGAACAATGGAAGAATTTGATGGAAAACACCGGATTCGAACCTGTAGCACTCAGCCATTACGCCATTAGTCAGGCGAAAATACTTCTATGGAATTACAATTACAGTTCTCTCTACACTCTGATCGAATCGGCGCCGGAATTTCTTTCTCTGGCATGGAACGACGTTCCTCTCTTAACTGTATCTTCCTGGCGTTGA 1773 46.93 MAYMCADSGNLMAIAQQLINQKQQQDQQQHHLSPLSPFSILPWTNNINPSSTMASSSSSSPNFSFGISSSSFSDPFHVAAPPDSSDPSFHFPNLDHPSAGFRFFPNFSGAGGEFESDEWMDSLVGGGDSTDSSTLPSGCEGYGEFGLYGADPFDGSPPSVVVLENSYKINSVPPPWPSCPPLVKEERVTNPPAERPLKNDVVEGSSSALEVESSSPVLKVLLDCARLCDSEPNRAAKTLNRISKSLREDGDPIERVGFYFGEALRKRLSLTAMKNCLDSTESDANSEDFLLSYKALNDACPYSKFAHLTANQAILEVTQRASKIHIVDFGIVQGVQWAALLQALATRATGKPVRVRISGIPAPSLGDSPAASLYATGNRLSEFAKILELNFEFQPILTPIENLKESSFSVQSDEVLAVNFMLQLYNLLDENSTGVHNALRLAKSLSPQIVTLGEYEASLNRNGFYSRFKNALKFYSSIFESLEPNLPRDSPERLQLEKLLLGRRIAGVVGTVEDSRRERRVRMEDKEQWKNLMENTGFEPVALSHYAISQAKILLWNYNYSSLYTLIESAPEFLSLAWNDVPLLTVSSWR 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22716402 22718573 + MELO3C017561.2.1 Cme07g01720 333736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01720 590 Pfam GRAS domain family 219 590 IPR005202 -
Cme07g01720 590 ProSiteProfiles GRAS family profile. 208 590 IPR005202 -
Cme07g01720 590 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 218 589 IPR005202 -
Cme07g01720 590 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 218 589 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01720 Cme-Chr7:22716402 Cme08g00842 Cme-Chr8:5556885 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41682 PF03514 GRAS 1.10E-107 CL0063 Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01720 - - csv:101211368 1045.42