Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01742 ATGTCGATCGCTAACGCGGACGACACGTCTCCGACGACCATGTCGGACGTCTCAACGGTCGACAAGACCAGCACCTCTGCAGACAGGGCTCAGTGGGTGGCAAACCCACCAGAGCCACCAGGGATATGTCGAGAGCTCATCCAGTGGCTTTGCGACGCCATGTTTCCCGACCCCACTAAGCTTTTTCCCCTCAAGAACAAGACTGGAACTGCGGTCGTGGGAAGGCTCTTGAAGGGTGTTTTCCCTATCCTCTGTTGGGGGAAGAGCTATAATCTTGGGAAGTTTAAAAATGATATCTTGGCTGGTTTGACACTTGCTAGCCTCTGCATTCCTCAGAGTATTGGTTATGCAAATCTGGCTAAGCTTGATCCTCAATATGGGCTTTATACGAGCATTGTGCCGCCGTTGGTTTATGCAATATTGGGAAGTTCGAGGGAAATAGCGATCGGACCGGTGGCTATAATATCTATGCTTTTGCCGACGATGATTCAGAAAATTCAAGATCCCGCCGCCGATCCTTTTGCCTATAGAAACCTTGTCTTCACCACCACTTTCTTCGCCGGAATCTTTCAAGCCGCCTTTGGACTTTTCCGATTGGGATTTTTGGTGGATTTTCTATCACAAGCTGCGATAGTTGGGTTCATGGGTGGAGCTGCCATTGTAATTGGACTTCAACAACTCAAAGGATTGCTTGGAATCACTCACTTCACTAATAAAACTGATATCATTTCTGTTATGGAAGCTGTTTTTGCATCATTCCATCATCTTAATGATCAATGGAATCCCTTGAACTTCATCATTGGCACTTCATTCCTTTCCTTCATCCTCATCACCAAATTATTGGGGAAGAAGTACAAGAAAGTATTCTGGTTACCAGCCATGGCTCCATTGGTGTCGGTAATCCTATCTACACTTTTGGTGTTCCTCACAAGAGCCGATGAACATGGCGTCAAGATCGTCAAACGTGTCCCCCCTGGCCTTAACCCCATCTCCACTCAAAACATCCAAATTCACACCCCTCACATCTCCCAAATCCTCAATGCTGCCCTCATCGTGGCCGTCGTAGCTCTCACGGAGGCGATTGCTGTGGGGAGATCATTGGCATCCATGAAAGGATACAACATCGATGGGAACAAAGAAATGGTTGCGTTAGGCTTCATGAACCTAGCTGGATCTCTTACTTCTTGCTACACAGCAACAGGTTCTTTGTCACGGTCAGCGGTGAATTTCAGTGCCGGTTGCGAGACACCAGTTTCGAATGTGGTGATGGCAGTGACGGTAATGATATCATTGAAGATGTTTACTAAGCTCCTCTACTTCACTCCCAACGCCATCTTGGCCTCCATTATTCTATCAGCACTTCCTGGCCTTGTTGACATTCACCAAGCTTACAATATATGGAAGATCGACAAGCTTGACTTCTTGGCCTGTCTCGCAGCTTTTTTTGGAGTTCTCTTTCTATCTGTCGAATTCGGCCTCCTCCTTTCGTTGGTGATATCATTTGCAAAGATAATAGTAATCTCAATCAAACCTGGGACAGAGATATTGGGTAAAATCCCTGGAACCGATACCTTTTGTGATATTCATCAATATCCAATGGCTCTCAACACTCCTGGAGTCCTCATCGTTCGTGTTAAATCTGGCTTACTTTGCTTTGCAAATGCCAATTTCGTAAAGGACAGGATTTTGAGGTTCATCAGCAGCCAAGAAGCATCAGGAAAGGGAATTGCTCAATTCTTGGTCATTGATCTCTCCAGTTAG 1761 46.11 MSIANADDTSPTTMSDVSTVDKTSTSADRAQWVANPPEPPGICRELIQWLCDAMFPDPTKLFPLKNKTGTAVVGRLLKGVFPILCWGKSYNLGKFKNDILAGLTLASLCIPQSIGYANLAKLDPQYGLYTSIVPPLVYAILGSSREIAIGPVAIISMLLPTMIQKIQDPAADPFAYRNLVFTTTFFAGIFQAAFGLFRLGFLVDFLSQAAIVGFMGGAAIVIGLQQLKGLLGITHFTNKTDIISVMEAVFASFHHLNDQWNPLNFIIGTSFLSFILITKLLGKKYKKVFWLPAMAPLVSVILSTLLVFLTRADEHGVKIVKRVPPGLNPISTQNIQIHTPHISQILNAALIVAVVALTEAIAVGRSLASMKGYNIDGNKEMVALGFMNLAGSLTSCYTATGSLSRSAVNFSAGCETPVSNVVMAVTVMISLKMFTKLLYFTPNAILASIILSALPGLVDIHQAYNIWKIDKLDFLACLAAFFGVLFLSVEFGLLLSLVISFAKIIVISIKPGTEILGKIPGTDTFCDIHQYPMALNTPGVLIVRVKSGLLCFANANFVKDRILRFISSQEASGKGIAQFLVIDLSS 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22891561 22896085 - MELO3C017580.2.1 Cme07g01742 333758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01742 586 Coils Coil 585 586 - -
Cme07g01742 586 PANTHER SULFATE TRANSPORTER 2.2 27 585 IPR030315 GO:0008272|GO:0015116
Cme07g01742 586 Pfam Sulfate permease family 95 479 IPR011547 GO:0016021
Cme07g01742 586 MobiDBLite consensus disorder prediction 1 31 - -
Cme07g01742 586 TIGRFAM sulP: sulfate permease 82 584 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cme07g01742 586 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Cme07g01742 586 ProSiteProfiles STAS domain profile. 547 586 IPR002645 -
Cme07g01742 586 PANTHER SULFATE TRANSPORTER 27 585 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cme07g01742 586 Gene3D STAS domain 510 586 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01742 Cme-Chr7:22891561 Cme09g00879 Cme-Chr9:11871499 0 dispersed
Cme07g01742 Cme-Chr7:22891561 Cme06g00580 Cme-Chr6:3732248 2.70E-174 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01742 K17469 - csv:116403192 1071.61