Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01755 ATGGTGGAGTTCCATGGAGAAATCCGATCCCATAACAACGATGAAGACGACCGAGATCAAGAACCAGAAGAGGAAATTAGCTACGATGATCTCAAGAAACGAATGTGGAGAGATCGACAACGGTTGAAGAAGATGAAGGAGAGGCATGATGAAGAAGAGCCTGAATCTGCTGCAAGAGAAGAAGCTTCTCGCCGGAAGAAAATGGCTCGAGCTCAAGATTCCATTCTTAAGTGCATGGATAAAATCATGGAAGCTTGTAAAGCTCAAGGGTTTGTTTATGGAATCGTTCCGGAAAAAGGAAAACCGGTCACTGGTTCTTCCGAGAGCCTCCGTGAATGGTGGAAAGATGATGTCCGATTCGAACAAGATGCTCCGATGGCCATAGCGAAATTTCTCCCCAAAGTAATTGAAGAATCAGGAATCGATCCCAATTCGTTTTTGCATTTACTCACCGATTTACAGGACACAACATTGGGATCCATTCTCTCCGCCTTGATGCAGCACTGTATTCCTCCACAGAGGAAATTCCCATTGGAAAAGGGTTTAGCGCCGCCATGGTGGCCGACGGGTAACGAGCTTTGTGTCTTGGCGGCGGTGATTAAACACATGTTACCTGATTTAGACAACATGAGGAAATTAATTCGGCAATCGAAGAATTTACAAGCGAAAATGACAGCGAAAGAGACACTCACTTGGGCTAAAGTTGTGAATCAAGAAGAAGCTCTGTTAAAATTAACAAAAAAGAGCTTAAGAATCACCGACGAAGAAGAAGAAGAAGAAGAACACAACAAAAACAGAGATAAACAGTGCAGCGATGAAATTATGACGAAACGAAAGTGTGTATCCGAACAAGAACCCATATCGGATTCGATGTTATACCCTTGCCAGAATCAATGGTGTCCACAGAGTGAAGTGCTAATGGGATTTATAGACAAGAGAGCAAGAACAGAGCATGAGACACAGTGCATTTGCAGAGGAGAGAGGTCAGAGGAATTCTCGGACGAGCAATCGATAGACACACATTTGAAGAGCGTGGTGGAGTGGATGAACTGGGAGCTGGGGAGGGCGGAGGCGGGGAGTGAGGAGGCGAGGATAGAAGATGCCGGAGATGGGTCGGGGAGCAGCACGGTGGAGGATTACGGGAGTGGATACTGGAATATGGATCTGAATGCGAGTCCCGGGGAGGATTTGAGTGGGCAACAACAAGATGCTACTTCTATTTGGGATTTGAGATATGAATGGGGAGCTGAAGAATGA 1257 45.82 MVEFHGEIRSHNNDEDDRDQEPEEEISYDDLKKRMWRDRQRLKKMKERHDEEEPESAAREEASRRKKMARAQDSILKCMDKIMEACKAQGFVYGIVPEKGKPVTGSSESLREWWKDDVRFEQDAPMAIAKFLPKVIEESGIDPNSFLHLLTDLQDTTLGSILSALMQHCIPPQRKFPLEKGLAPPWWPTGNELCVLAAVIKHMLPDLDNMRKLIRQSKNLQAKMTAKETLTWAKVVNQEEALLKLTKKSLRITDEEEEEEEHNKNRDKQCSDEIMTKRKCVSEQEPISDSMLYPCQNQWCPQSEVLMGFIDKRARTEHETQCICRGERSEEFSDEQSIDTHLKSVVEWMNWELGRAEAGSEEARIEDAGDGSGSSTVEDYGSGYWNMDLNASPGEDLSGQQQDATSIWDLRYEWGAEE 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 23062323 23063680 + MELO3C017592.2.1 Cme07g01755 333771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01755 418 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 14 413 IPR006957 GO:0005634
Cme07g01755 418 MobiDBLite consensus disorder prediction 43 66 - -
Cme07g01755 418 MobiDBLite consensus disorder prediction 1 30 - -
Cme07g01755 418 SUPERFAMILY DNA-binding domain of EIN3-like 147 243 IPR023278 GO:0003700|GO:0005634
Cme07g01755 418 PANTHER ETHYLENE INSENSITIVE 3-LIKE 5 PROTEIN 14 413 - -
Cme07g01755 418 MobiDBLite consensus disorder prediction 1 16 - -
Cme07g01755 418 Coils Coil 28 48 - -
Cme07g01755 418 Pfam Ethylene insensitive 3 29 193 IPR006957 GO:0005634
Cme07g01755 418 Pfam Ethylene insensitive 3 193 240 IPR006957 GO:0005634
Cme07g01755 418 Gene3D - 57 138 IPR023278 GO:0003700|GO:0005634
Cme07g01755 418 Gene3D - 194 249 IPR023278 GO:0003700|GO:0005634
Cme07g01755 418 Gene3D - 146 193 IPR023278 GO:0003700|GO:0005634
Cme07g01755 418 MobiDBLite consensus disorder prediction 358 379 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01109 Cme-Chr3:20497648 Cme07g01755 Cme-Chr7:23062323 1.76E-88 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41686 PF04873 EIN3 3.00E-75 No_clan Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01755 K14514 - csv:116406094 751.125