Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01772 ATGTTGCTAGATGATACGCCGACGATGCTTGGAGAGAAACTCTCTCTTTCTAACATTAATTCGCTTAGATCTTACGAAGTCGTTGATGAAGTGAAAGAGGCTTTGGAGAAGGTTTGTCCTGGCATCGTTTCTTGTGCAGATATCATAATTATGGCATCCAGAGACGCTGTTGCTTTGACAGGCGGCCCTGATTGGATAGTGCGACTGGGGCGGCTGGACAGTTTAACAGCAAGCCAAGAGGACGCAGACCAAATCATGCCAAGTCCAAGAGCGAATGCAACTTCTCTCATTGACCTTTTCAGCAAATACAACCTCTCCGTCAAAGATTTGGTATCTCTTTCAGGTTCGCACTCAATTGGCAAAGGCCGATGTTTCTCCATCATGTTTCGACTCTACAATCAATCCGGTACGGGACGGCCGGACCCAGCAATCGAGCCTAGGTTTAGAGAAGAGCTCTTCAAGCAATGCCCTCATGGCGTGGATGAAAATGTCACACTCAACCTTGATTCTACACCTTATATTTTTGACAATCAGTACTTCAAGGACTTGGTTGGTGGGAGGGGGTTGTTGAATTCTGATGAAACTCTTTACACATTTTATGAAACTAGAAGGTACGTGAGGTGGTTTAGCAAAGATCAAAGTGCATTTTTTAAGGCTTTTGTTGAAGGTATGTTGAAGATGGGTGACTTGCAATCTGGCCGGCCGGGGGAAGTGAGAAGGAACTGTCGGGTAGCGAATGGCCAATCTGTGACCATATAA 759 45.59 MLLDDTPTMLGEKLSLSNINSLRSYEVVDEVKEALEKVCPGIVSCADIIIMASRDAVALTGGPDWIVRLGRLDSLTASQEDADQIMPSPRANATSLIDLFSKYNLSVKDLVSLSGSHSIGKGRCFSIMFRLYNQSGTGRPDPAIEPRFREELFKQCPHGVDENVTLNLDSTPYIFDNQYFKDLVGGRGLLNSDETLYTFYETRRYVRWFSKDQSAFFKAFVEGMLKMGDLQSGRPGEVRRNCRVANGQSVTI 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 23269540 23272802 + MELO3C017603.2.1 Cme07g01772 333788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01772 252 PRINTS Plant peroxidase signature 42 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01772 252 PRINTS Plant peroxidase signature 61 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01772 252 PRINTS Plant peroxidase signature 23 36 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01772 252 PRINTS Plant peroxidase signature 222 235 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01772 252 PRINTS Plant peroxidase signature 108 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01772 252 PRINTS Plant peroxidase signature 166 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01772 252 PRINTS Plant peroxidase signature 182 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01772 252 Gene3D - 2 246 - -
Cme07g01772 252 PRINTS Haem peroxidase superfamily signature 61 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g01772 252 PRINTS Haem peroxidase superfamily signature 168 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g01772 252 PRINTS Haem peroxidase superfamily signature 43 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g01772 252 PRINTS Haem peroxidase superfamily signature 109 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g01772 252 Pfam Peroxidase 12 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g01772 252 CDD secretory_peroxidase 2 244 IPR033905 GO:0004601|GO:0042744
Cme07g01772 252 ProSitePatterns Peroxidases proximal heme-ligand signature. 109 119 IPR019793 -
Cme07g01772 252 Gene3D Peroxidase, domain 2 87 227 - -
Cme07g01772 252 SUPERFAMILY Heme-dependent peroxidases 2 246 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme07g01772 252 ProSiteProfiles Plant heme peroxidase family profile. 1 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g01772 252 PANTHER PEROXIDASE 72-RELATED 1 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g01772 252 PANTHER PEROXIDASE 17 1 247 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01772 Cme-Chr7:23269540 Cme07g01686 Cme-Chr7:22396550 2.38E-72 dispersed
Cme07g01772 Cme-Chr7:23269540 Cme08g00553 Cme-Chr8:3469424 1.46E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01772 K00430 - csv:116406089 469.159