Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01776 ATGGCAAAACTCTATCTTACTGCTCTAGTTTTTGCTTGCTTTCATTACTTTGCGGTGTCTGATTTTCAAGGTGAGGCACTCTTTGCGTTCAAGAAGGCATTGAATGCAACAAGTAGTCAGCTTGAAGATTGGAACCCAAATCATGTCAATCCATGCAGTAGTTGGTCCAATATTATGTGTAATGGGAACAATGTGACAGCTATAACCTTGCCAACGATGGGATTTACTGGAACCTTGTCTCCAGGAATTGCTGTCATAAAATCTCTTTCAACTCTGAACTTGCAGGGGAATTACATAACTGGAGGGATACCAGAAGAGTTTGGAAACTTGACAAATTTGGTCACTTTGGATCTCGGAAATAACAGCCTAATTGGTCAAATACCATCTTCCCTGGGTAACCTTAAGAATCTACGGTTCCTAACTCTGAGTCAAAATCACTTAACTGGGACTATTCCTGAGACATTGTCAACCCTTCCTAGCTTGATCAATCTTTTTCTTGATTCGAATAATCTCAGTGGCCAGATTCCGGAGCAATTATTTCTAGTTTCAAAATTCAACTTTTCGGGAAATAAGTTGGATTGCGATAACAATTCACGTTGGTCCTGTGATTCGGACAGTACAAATTCAGGTGCTTCAAATAAGTCGAAGGTTGGGCTCATAGCTGGACCTATTTCTGGGTTAATAGTTGCTCTTCTTTTGGTCGGATTACTATTTTTGTTGTGCAAGCATAGATATAAAGGCTACAAGGGTGAAGTCTTCGAAGATGTTCCCGGTGAAATTGATCGAAAAATTGCATTCGGTCAGCTGAAAAGATTTGCATGGAGGGAGCTACAGCTAGCTACAGAAAATTTTAGTGAAGAAAATGTTATAGGACAAGGAGGCTTTGGAAAGGTTTACAAAGGAGTGCTTGCAGATGGCACCAAGGTTGCAGTGAAACAGTCAACTGATTATGAACGCCTTGGGGGAGATGCTTCTTTTTTGCGTGAAGTTGAGATGATTAGTGTAGCTGTTCATAGAAACCTATTGCGGCTGATTGGGTTTTGTACAACTCAGACTGAACGCTTATTGGTGTATCCCTATATGCAGAACTTGAGTGTTGCCAACCGTCTTCGAGAACTTAAGCCTGGGGAACCTATTTTAGATTGGCCTACTCGAAAACGTGTGGCATTGGGCACAGCTCGTGGTTTAGGGTATCTTCATGAACATTGCAATCCAAAGATTATTCACCGAGATGTTAAGGCTGCTAATGTCTTGCTTGATGAGGATTTTGAAGCAGTTGTTGGTGATTTTGGCCTCGCCAAGTTGGTTGATGTTAAGAAGACTTGCGTCACAACTCAAGTTCGGGGGACAGCTGGCCACATAGCACCGGAGTACTTATCCACTGGGAAATCGTCAGAAAAGACGGATGTTTTTGGTTATGGCATTATGCTTTTAGAGCTTATTACAGGACAACGTGCGATTGACTTCTCACGCTTCGATGGAGATGATGATGTTTTACTGCTAGACCATGTCAAGAAATTGGAAAGGGAGAAGCAACTGAATATTATTGTGGACGAAAACCTGACTAACTACGATATTAGAGAGGTGGAGACAATGGCTCAAGTTGCGCTACTGTGTACGCAGCAATCTTCGGCTAGTCGGCCAACAATGTCACAAGTCATTCGGATGCTGGAAGGTGAGGGACTCGGAGAGAGGTGGGAGGAATGGCAGCATTTAGAGGTGAGTCGCAGACAAGATTACGAGAGAATGCAAAGAAGATTTGAATTAGGGAATGATTCCATTTATAAACAGGAAGCTATTGAGCTATCTGGTGGAAGATAA 1821 42.23 MAKLYLTALVFACFHYFAVSDFQGEALFAFKKALNATSSQLEDWNPNHVNPCSSWSNIMCNGNNVTAITLPTMGFTGTLSPGIAVIKSLSTLNLQGNYITGGIPEEFGNLTNLVTLDLGNNSLIGQIPSSLGNLKNLRFLTLSQNHLTGTIPETLSTLPSLINLFLDSNNLSGQIPEQLFLVSKFNFSGNKLDCDNNSRWSCDSDSTNSGASNKSKVGLIAGPISGLIVALLLVGLLFLLCKHRYKGYKGEVFEDVPGEIDRKIAFGQLKRFAWRELQLATENFSEENVIGQGGFGKVYKGVLADGTKVAVKQSTDYERLGGDASFLREVEMISVAVHRNLLRLIGFCTTQTERLLVYPYMQNLSVANRLRELKPGEPILDWPTRKRVALGTARGLGYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVKKTCVTTQVRGTAGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAIDFSRFDGDDDVLLLDHVKKLEREKQLNIIVDENLTNYDIREVETMAQVALLCTQQSSASRPTMSQVIRMLEGEGLGERWEEWQHLEVSRRQDYERMQRRFELGNDSIYKQEAIELSGGR 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 23290559 23299630 - MELO3C017610.2.1 Cme07g01776 333792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01776 606 ProSitePatterns Protein kinases ATP-binding region signature. 290 312 IPR017441 GO:0005524
Cme07g01776 606 Pfam Protein kinase domain 285 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g01776 606 Gene3D Transferase(Phosphotransferase) domain 1 361 577 - -
Cme07g01776 606 SMART serkin_6 284 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g01776 606 PANTHER LRR RECEPTOR KINASE SERK2 6 606 - -
Cme07g01776 606 SUPERFAMILY Protein kinase-like (PK-like) 262 558 IPR011009 -
Cme07g01776 606 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Cme07g01776 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Cme07g01776 606 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 606 - -
Cme07g01776 606 Gene3D Ribonuclease Inhibitor 21 218 IPR032675 -
Cme07g01776 606 Pfam Leucine rich repeat 88 147 IPR001611 GO:0005515
Cme07g01776 606 ProSiteProfiles Protein kinase domain profile. 284 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g01776 606 Gene3D Phosphorylase Kinase; domain 1 253 360 - -
Cme07g01776 606 SUPERFAMILY L domain-like 23 195 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01776 Cme-Chr7:23290559 Cme11g00012 Cme-Chr11:141851 0 dispersed
Cme07g01776 Cme-Chr7:23290559 Cme07g01777 Cme-Chr7:23303566 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65030 PF00069 Pkinase 2.00E-43 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01776 - - csv:101220063 1129.78